Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco11g1155 ATGGCGGCTCTTCCGGGTTCTCTTCAGTTGTCCTATGGATTGGGACCTTGGAGGAACCAGAATTACAATAAACAACCTTTGCTCCTGAAACAAGAATGCTGGAGACTTCAACTCTCTTGCAATATAAACAGGCCATTACATGCCTTATCTTGCAAATCTCAGTCTTTTAAGTGTCATTCTTTTCTAGTACCTGGCAGACCAAGTGAACTACCGGTTGTTAAGGTGGCTGCCACAGCACTGACAAGGTCCTGCAATGTTTTACAAGGTAATCCTGTCATTGCAAAGTTAATTCCAGCACTTGGTTTAATCACATTTGCTATATGGGGTGTCGGCCCATTACTATATATGACAAGAAAACTGTTCCTTCAGAGGGATAGCAATTGGAAGAAAAGCAACACAAATTATATAGTAACTTCTTATCTTCGGCCAATAATGTTATGGATTGGAGCTATACTTATGTGCAGAGCTTTGCAGTCAGTAGTTCTACCTACAGAAACTAGCCAGATTGTTAAGGAAAGGCTTTTGAATTTTGTGAGATCATTGTCAACTGTACTTTCATTGGCATATTGTTTATCAAGTGTGATTAAACAAGCACAGAGAATATTTGTTCAGAGTGCTGATGCCACTGAGGCAAGAAATATGGGATTCCGATTTGCTGGCAATGCTCTGTACTCTGCAGTATGGATTGCCGCCTTTTCATTGTTCATGGAATTGCTGGGTTTCTCTACCCAGAAATGGCTAACTGCAGGAGGTCTTGGGACAGTTTTACTTACTCTTGCTGGTCGTGAGATATTTACAAACTTCCTTTCCAGCTTGATGATTCACGCAACTGGACCTTTTGTGGCGAATGATTGGATTCAAACAAAGATTGAAGGATATGATGTTTCTGGTACTGTAGAGCGTGTTGGCTGGTGGTCACCAACAATCGTAAGAGGTGAAGGTCGTGAGGCTCTTCATATTCCAAACCACAAATTTACAATGAATGTTGTGAGGAACCTTAGTCAGAAAACACATTGGAGGATCAAAACCCACTTATGCATCAGTCATTTGGATGTTGACAAGATTAATAATATTGTTGCTGACATGCGGAAAGTCTTGGCCAAAAATCCTCAAGTAGAGCAGCAGCGGCTGCACAGGAGAGTGTTTCTGGAGGATGTAGATCCTGAAAATCAATCTCTTATGATACTGGTGTCTTGTTTTGTCAAGACCTCACGTCATGAAGAGTATTTTCGTGTTAAGGAAGTTATACTATTAGATCTTCTCAGAGTCATTGGTCATCATGGGGCTCGACTTGCAACACCAGTTCGTACTCTGCAGAAGAGGTTTAGTGATGATGACTTAGAGAACATACCCTTTTCAGATTCTTATGTTGATGGTGCTAGAACAGCGCGCAACCGTCCATTATTATTGATTGAACCATCTTACAAAATCAACTCTGATGATAAAACAAGAAGCCAAAGAACACAAACCAAAAGTTCTAAAAAGACTGATGCCAAGGCTGGACCAACGGTGGTTCCAGATTCTAATGCTGGAGAAACTACTTCAAACTCCAAGTTAGGTTCCAAAGCTGTGATGCCTAATTCTGATGTGAATGGAAAATCTGAAAATGCCGCGTCATCCATGGTTCACCCTGCAGCACGTGAAGATGATCCGCAGAAACCAGATTCAAATACTAATGGAAATATCAGGTTGCCAGATATCTCTGCTTCCAATTCCAAAGCAAATTTAAGCCAGGACTCTAACCTTAAGCAGAAAACTGACCCTGACAATATAATGTCATCTTCAGCTTCAAGTAATGCTGACATAACACTAGTGGATCCTCTGGATAAACCACCGGAACAACAAGGCGAAAGGAAACCGGCCAATCAGGCTCCTACATGCAGGCTTGATGTTGAAGAGAATATAGTCCTTGGTGTTGCATTGGAGGGATCAAAGAGAACCCTTCCTATTGAGTATTGA 1959 0.4145 MAALPGSLQLSYGLGPWRNQNYNKQPLLLKQECWRLQLSCNINRPLHALSCKSQSFKCHSFLVPGRPSELPVVKVAATALTRSCNVLQGNPVIAKLIPALGLITFAIWGVGPLLYMTRKLFLQRDSNWKKSNTNYIVTSYLRPIMLWIGAILMCRALQSVVLPTETSQIVKERLLNFVRSLSTVLSLAYCLSSVIKQAQRIFVQSADATEARNMGFRFAGNALYSAVWIAAFSLFMELLGFSTQKWLTAGGLGTVLLTLAGREIFTNFLSSLMIHATGPFVANDWIQTKIEGYDVSGTVERVGWWSPTIVRGEGREALHIPNHKFTMNVVRNLSQKTHWRIKTHLCISHLDVDKINNIVADMRKVLAKNPQVEQQRLHRRVFLEDVDPENQSLMILVSCFVKTSRHEEYFRVKEVILLDLLRVIGHHGARLATPVRTLQKRFSDDDLENIPFSDSYVDGARTARNRPLLLIEPSYKINSDDKTRSQRTQTKSSKKTDAKAGPTVVPDSNAGETTSNSKLGSKAVMPNSDVNGKSENAASSMVHPAAREDDPQKPDSNTNGNIRLPDISASNSKANLSQDSNLKQKTDPDNIMSSSASSNADITLVDPLDKPPEQQGERKPANQAPTCRLDVEENIVLGVALEGSKRTLPIEY 652
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco11g1155 652 Gene3D - 178 276 - -
Acco11g1155 652 PANTHER OW CONDUCTANCE MECHANOSENSITIVE CHANNEL 23 651 IPR045042 -
Acco11g1155 652 Pfam Mechanosensitive ion channel 222 430 IPR006685 GO:0016020|GO:0055085
Acco11g1155 652 SUPERFAMILY Sm-like ribonucleoproteins 264 334 IPR010920 -
Acco11g1155 652 MobiDBLite consensus disorder prediction 475 626 - -
Acco11g1155 652 MobiDBLite consensus disorder prediction 477 494 - -
Acco11g1155 652 MobiDBLite consensus disorder prediction 507 538 - -
Acco11g1155 652 Gene3D - 279 332 IPR023408 -
Acco11g1155 652 MobiDBLite consensus disorder prediction 555 602 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco11g1155 Acco-ChrAcco11 24803236 24808777 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco11g1155 38 651 Mechanosensitive Ion Channel Family AT5G10490 56.423 0.0 674