Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco11g1128 ATGGCAGACAACGTGGACCCTGTGACTTCAAACCTTCGGTGTTTGGAAAACAGCAATACATGCTTTGACAATTCCGAATGTAATACTGGGGATGAGTTTGGAATTTCTTTTAATCAACTAAACGTTAATGGACGCCATCATTGTCCTCCTTGGGATAGCCATGGATCCGGGTGTTTTCCGATTCAGAGTGATGAAAGAGTCAGATTAATTGTTGTGAGGGAGAAAGAACATTTGCCCAGAAATGATTACTTGAAGAGGCTGCGTAGTGGAGACCTAGAGTTGAGTGTTAGGAAGGAGGCTCTTGATTGGATTTTGAAGGCTCATGCCTATTATGGTTTTGGTCCATTGAGCTTTTGTCTATCTGTGAACTACTTGGATCGATTCCTATCTACATATGAGTTGCCTAGAGGTAAATCTTGGACCGTGCAATTGCTAGCTGTCGCTTGTTTGTCATTGGCAGCTAAATTGGAGGAGATAGAAGTGCCCCTCTTAGTAAATTTACAGGTTGGAGAACCAAAGTTTGTATTTGAAGCTAAAACCATTGAAAGAATGGAGCTACTAGTGTTAAGCACCTTGAGATGGAAAATGCATGCTTTAACTCCTTGTTCCTTCATAGACTATTTCCTCATGAAACTCACTACTGGGAAACATCCAACAAATTCATCCATTGCAAGATCAATACAGATCATAGTTGGCACAATTAGGGGTATTGACTTCTTGGACTTCATGCCTTCTGAAATTGCTGCAGCTGTGGCCATTTCTGTCACAAGGGAACTGCAAACAATTGAGATCCACATCGACAAACTCATCTCTGGTTTAATGATGAAGGAAAAGAGAGTTCTCAAGTGTCTTGAACTGATAAGAGACTTGTCCTTGATGAGTGTTTCTGCAAGTCTGAGCAGAAACTTAATGCCATCGGTTCCTCAAAGCCCAGATGGGGTGCTTGATGCTGCAGCATGCTTGAGCTACAAAAGTGATGAATTAACTGTTGGCTCATATCAAAACTCTTCACACAACAATACTTGTAATGATGCTAAGAGGACCAAATCAGAAACACCTTCCTCTGATGATGGGACTTTCAAGTCATGA 1089 0.4141 MADNVDPVTSNLRCLENSNTCFDNSECNTGDEFGISFNQLNVNGRHHCPPWDSHGSGCFPIQSDERVRLIVVREKEHLPRNDYLKRLRSGDLELSVRKEALDWILKAHAYYGFGPLSFCLSVNYLDRFLSTYELPRGKSWTVQLLAVACLSLAAKLEEIEVPLLVNLQVGEPKFVFEAKTIERMELLVLSTLRWKMHALTPCSFIDYFLMKLTTGKHPTNSSIARSIQIIVGTIRGIDFLDFMPSEIAAAVAISVTRELQTIEIHIDKLISGLMMKEKRVLKCLELIRDLSLMSVSASLSRNLMPSVPQSPDGVLDAAACLSYKSDELTVGSYQNSSHNNTCNDAKRTKSETPSSDDGTFKS 362
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco11g1128 362 FunFam D2/4-type cyclin 80 193 - -
Acco11g1128 362 SMART cyclin_7 102 190 IPR013763 -
Acco11g1128 362 ProSitePatterns Cyclins signature. 97 128 IPR006671 -
Acco11g1128 362 MobiDBLite consensus disorder prediction 332 348 - -
Acco11g1128 362 FunFam D6-type cyclin 194 285 - -
Acco11g1128 362 MobiDBLite consensus disorder prediction 332 362 - -
Acco11g1128 362 SUPERFAMILY Cyclin-like 58 197 IPR036915 -
Acco11g1128 362 CDD CYCLIN_AtCycD-like_rpt1 96 194 - -
Acco11g1128 362 Pfam Cyclin, C-terminal domain 200 298 IPR004367 -
Acco11g1128 362 CDD CYCLIN_AtCycD-like_rpt2 200 287 - -
Acco11g1128 362 Gene3D - 73 284 - -
Acco11g1128 362 PANTHER CYCLINS 72 288 IPR039361 -
Acco11g1128 362 Gene3D - 80 197 - -
Acco11g1128 362 Pfam Cyclin, N-terminal domain 71 196 IPR006671 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco11g1128 Acco-ChrAcco11 24425362 24427436 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco11g1128 62 267 Core Cell Cycle Gene Families AT5G65420 60.096 2.89e-89 268