Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco11g1126 ATGCGGGCTCTCAGGAACGCCCCTGATACTGACTCGCAGGTGAGGACTATTGATTTGAATTGGACGACGACGAAGACGACGGAGGAGGAGGAGGAGGAGGAGGAGGAGGAAGACATGGATTTTGAGGAGCAAGAGGAGGAACTTGGGATGGGATCCACAGGGAGTTACGACTCCATGGGGAATCCGATCCGAATGAAAATGGCGGGTGGAGGGGAAGTCATGGTGGTTCAGGCAACCAGGAATAGTAACAACAAGGCGAGGTATAAGGAGTGCTTGAAGAACCACGCGGTGAGCATCGGCGGCCACGCGCTCGACGGCTGCTGCGAGTTTCTCCCCGCCGGAGCGGAGGGCACGATGGACGCCCTCAAATGCGCTGCCTGTAACTGCCACCGCAATTTCCACCGTAAGGAAACGGACGCGATTGGTGTTGGAACCGGGGACGGTTTTTTGTTGACCAACAATCCTCACTTCCACCAGCAGCATCAACCGCCTCAGTTCTCGCCGTATTACCGGACGGCACCGGCGGGGTACTTTCACGTGGGAGGACTGCAGAGGAATCCGGCTACGCTGGCGCTGCCGTCAACGTCGGGAGCAGGGTGTGGGGTTCAGAACATAATGGACGATCAAGAAGATGTTTCGAATCCTAGTGGAGGTGGTGGTGGAGGAGGAGGAGATGGGTCGAAGAAGAGGTTCAGGACCAAGTTCACGGTGGAGCAAAAGGACAAAATGCTGGGATTAGCTGAGAAACTGGGTTGGAGGATTCAGAAGCACGACGAGGCGGTGGTCCAACAGTTCTGTGACGAGACGGGAGTGAAGCGTCACGTTCTCAAGGTTTGGATGCATAACAACAAGCACACTCTTGGTAAGAAGCCCTAG 876 0.5582 MRALRNAPDTDSQVRTIDLNWTTTKTTEEEEEEEEEEDMDFEEQEEELGMGSTGSYDSMGNPIRMKMAGGGEVMVVQATRNSNNKARYKECLKNHAVSIGGHALDGCCEFLPAGAEGTMDALKCAACNCHRNFHRKETDAIGVGTGDGFLLTNNPHFHQQHQPPQFSPYYRTAPAGYFHVGGLQRNPATLALPSTSGAGCGVQNIMDDQEDVSNPSGGGGGGGGDGSKKRFRTKFTVEQKDKMLGLAEKLGWRIQKHDEAVVQQFCDETGVKRHVLKVWMHNNKHTLGKKP 291
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco11g1126 291 MobiDBLite consensus disorder prediction 9 23 - -
Acco11g1126 291 NCBIfam homeobox domain, ZF-HD class 228 284 IPR006455 -
Acco11g1126 291 SUPERFAMILY Homeodomain-like 216 289 IPR009057 -
Acco11g1126 291 ProSiteProfiles Zinc-finger ZF-HD dimerization-type profile. 88 137 IPR006456 -
Acco11g1126 291 Pfam ZF-HD protein dimerisation region 86 138 IPR006456 -
Acco11g1126 291 NCBIfam ZF-HD homeobox protein Cys/His-rich dimerization domain 87 137 IPR006456 -
Acco11g1126 291 MobiDBLite consensus disorder prediction 206 230 - -
Acco11g1126 291 MobiDBLite consensus disorder prediction 1 44 - -
Acco11g1126 291 FunFam Zinc-finger homeodomain protein 2 222 289 - -
Acco11g1126 291 MobiDBLite consensus disorder prediction 27 44 - -
Acco11g1126 291 Coils Coil 25 47 - -
Acco11g1126 291 Gene3D - 213 288 - -
Acco11g1126 291 PANTHER ZINC-FINGER HOMEODOMAIN PROTEIN 2 58 287 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco11g1126 Acco-ChrAcco11 24394726 24396063 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco11g1126 39 287 ZF-HD Transcription Factor Family AT4G24660 50.000 8.55e-72 219
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF zf-HD Acco11g1126 ZF-HD_dimer 7.7e-29 No_clan