Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco11g1062 ATGTCAACACTTAACCGTCTTTTTGGCCTTCCAGAGCAAATATGTTACGTTCAATGTGGATTCTGTGGCACCATTTTAATGGTGAGCGTCCCATGCACTAGTTTGTCTATGGCGGTCACAGTCAGATGTGGACATTGCACAAGCCTCCTCTCTGTTAATATGATGAAAGCTTCTTTTGTCCCCTTACACCTTTTAGCTTCCCTTTCTCATCTTCAGCCAAAAGAGGAGAGTCCAGAAGAAGAAGCAAACAAGACTTTGGAAATCCATAACCATAATGGAAAATCCATGATGACCTATTCTGATTGTGAGGAAGAGGATGCAATTCCCATGAGCATTGTGGCAAGCAAACCCCCAGAGAAGAGACAGCGAACACCATCAGCTTATAACCTCTTCATCAAAGAAGAGATCAGAAGGCTAAAGGCTGAAAACCCTGACATGGCTCACAAAGAGGCTTTTAGCACAGCTGCAAAAAATTGGGCTTGCAAAGGAGATGAAGAAAGCTGCGGCCAGTCACAGCAACTTGTGGATCTTGAAGATGATGAGGCTAAAGAAGAAGAGGAGGAAGAAGAAGGAGAAGGCCAAGGTTTCCGTGAAAGAAAGGTTCCAAGGAATTCAATCTGGTCAAGGACACCATTTGAGTGA 642 0.4408 MSTLNRLFGLPEQICYVQCGFCGTILMVSVPCTSLSMAVTVRCGHCTSLLSVNMMKASFVPLHLLASLSHLQPKEESPEEEANKTLEIHNHNGKSMMTYSDCEEEDAIPMSIVASKPPEKRQRTPSAYNLFIKEEIRRLKAENPDMAHKEAFSTAAKNWACKGDEESCGQSQQLVDLEDDEAKEEEEEEEGEGQGFRERKVPRNSIWSRTPFE 213
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco11g1062 213 MobiDBLite consensus disorder prediction 162 213 - -
Acco11g1062 213 MobiDBLite consensus disorder prediction 178 192 - -
Acco11g1062 213 Coils Coil 174 194 - -
Acco11g1062 213 CDD HMG-box_SF 123 166 - -
Acco11g1062 213 Pfam YABBY protein 11 160 IPR006780 GO:0007275
Acco11g1062 213 PANTHER PROTEIN YABBY 6-RELATED 11 161 IPR006780 GO:0007275
Acco11g1062 213 Gene3D High mobility group box domain 113 204 IPR036910 -
Acco11g1062 213 SUPERFAMILY HMG-box 114 166 IPR036910 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco11g1062 Acco-ChrAcco11 23032784 23034226 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco11g1062 2 213 C2C2-YABBY Transcription Factor Family AT1G23420 59.641 5.52e-71 215
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2C2-YABBY Acco11g1062 YABBY 1.2e-59 CL0114