LGRPv2

Gene search

Sequence information

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Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Acco11g1038	ATGTCTCAAATAAAGGAATTTAAACTTTTTGGTGCAACTATAGTGCTTCCGGCTGAGAATCAAATATCAGAAGAGGCTATGGATCAAGAAAGAAGGACAAACAACAATGAGAGACAAGGAGATGAGATTCAAAAAAACAAAGATCATCATGATCAGATACTAGAAAAGAGATCAACCACATCTCAAACAAGTGAATTTAAACTTTTTGGTGTTACAATAGTGCATCCTACTGAGAATCAAATATCAGAAGAGGTTGTAGATCAAATCAATCAAGTATCAAGAGAGGTGGCCAAAGAGGAAGAGGAACCATCAATAAAAAGAAGGAGGACCAACAAAAAGAGAAAGATCAAGGATAAAAATACTTCTTCATCAAAAGAATCATCATCTGATCGTGTCTCATTAATGTTGCCAGAGATGATGAAGAAGAAGATCAATGAGATTGAGGGCCGTAGTATCATAAAGATCATAGAAAAGAAGGTATATGAGAGTGATTTGTGTAAAACCAACGATCGTTTATCAATTCCAGAGAAAAAGATTTTGCTGAAAGCTGATGATTTTCTTAAACCTGAAGAGCTTGATTTCTTAATGACAAAAGATGCAAAAACTAATAAGCTTCAAGGTATTCCTGTGTTGGTGTTGGATCCAAATCTCAAAGAGTTCAACTTAATTTTGAAAAGGTGGGAAATGACAACTTCCATTACTTATAATTTGACTCACCGTTGGTATGATGTTGTGAAGTGCAATAATTTTCAAGTTGGCGATGTGGTGCAATTATGGTCATTTAGAAGACTTGATGATCAACTTGGATTTGCAATAGTCAAGCTTTAA	828	0.3454	MSQIKEFKLFGATIVLPAENQISEEAMDQERRTNNNERQGDEIQKNKDHHDQILEKRSTTSQTSEFKLFGVTIVHPTENQISEEVVDQINQVSREVAKEEEEPSIKRRRTNKKRKIKDKNTSSSKESSSDRVSLMLPEMMKKKINEIEGRSIIKIIEKKVYESDLCKTNDRLSIPEKKILLKADDFLKPEELDFLMTKDAKTNKLQGIPVLVLDPNLKEFNLILKRWEMTTSITYNLTHRWYDVVKCNNFQVGDVVQLWSFRRLDDQLGFAIVKL	275

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Annotation information

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Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Acco11g1038	275	Gene3D	-	146	274	IPR015300	-
	Acco11g1038	275	PANTHER	B3 DOMAIN PLANT PROTEIN-RELATED	25	275	IPR005508	GO:0003677
	Acco11g1038	275	Coils	Coil	82	102	-	-
	Acco11g1038	275	Pfam	B3 domain-containing protein At2g31720-like	138	246	IPR005508	GO:0003677
	Acco11g1038	275	MobiDBLite	consensus disorder prediction	24	56	-	-
	Acco11g1038	275	SUPERFAMILY	DNA-binding pseudobarrel domain	154	262	IPR015300	-
	Acco11g1038	275	MobiDBLite	consensus disorder prediction	95	133	-	-
	Acco11g1038	275	MobiDBLite	consensus disorder prediction	18	60	-	-

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Duplication type information

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Select	Gene	Chromosome	Start	End	Duplicated_type
	Acco11g1038	Acco-ChrAcco11	22749368	22750275	Dispersed

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Functional genes information

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Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Acco11g1038	140	272	B3 DNA Binding Superfamily	AT1G05930	29.851	6.40e-13	65.9

Showing 1 to 1 of 1 entries