Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco11g1028 ATGAAGAAGCTCGAGATCAAGAAATTTAAGGATGCTCTAGTGAAATATAGGAATGAGCGTTGTAGTTTAGGACCAACAAGAGGTTTGGATGAGACTGAGTTGGAAAAGTTGGTAATGGGTGGTGAGTTAGCGGCTGAGTCGGCATTGTTGTACTCTATGGAGAAGAAAAATCACTTTTGTATCGATATCAAATTATCAAAGGGATGGACGCCGAATCAAGGTAGGTTTAGATTGGCCGGTTGTTCTCGGAATCGCGTTGGGAAATTTCTGATCTCAGTATCAGAAATGGCTTCCCGAAGATCTAATGTCGATTCTGATTCGAAATCAAGCGAGATTTCGTATTCTTCTAAATTGTCCGCTGAAGATGCGGCTCCATCTCCAGATTCTCCATCATCGTCCAATAGTACGGATTCTACGCCTCCAATTTCTCCATCGACCTCGCCGCCGTCGCGTTCTCCGCCTCCCACGATTTCTCCACCACCTTCACCGAGCCCGCCTCCATCATCACCACAGTATTCGCCACCTCCACCATCGTCTCCTCCCCCTGAACAGTCACCACCTCCACCGTCTCTTCCCCCACCACCGTCTCGTCCCCCACCGTCCTCTCCGCCACCAGAGTTACCGTCACCGTCACCTCCACCACAATCACAATCCCCACCTCCACCGGATCAATCTTCTCCGCCTCCATTCTCTCCTCCAACTCCACCTTCATCTCCGCCTCTATCGCAGAATCCATCTACACCACTGACACCGGCATCCCCAAATAATTCGTCAGCCACCGGCAACCCACTACCACCTCCTTCAACTGTCGTCCCCCCTGCAGTTGCCACTGTCCCACCAAATATACCCAGCTCTCCTCCGCCACCATGGGTGTGGCCCCCTCCTCCGCTGCCGCAATCACCTTCCACCACAAGCTCAAGCGGTTCTTCGAGTGGCTCCACGTTGCACTCGTCGTCAAGAGATAGCAACAGCGGGGGTAATTTAAATAATTACATTGGTTATGTCATGGCCGGAGTGTTCGGTTTTATCCTGCTCGCCATATTGATTGTTTTCGCGGTAAGGAAGAAGAGAAAAGGAAAAGTGGCCCATGTCACACATTTTGGCGCCGCCAATAACTTGTATAATAAACCAGGTACGGAAGGCTCTTACTATGCTCAGCAGTCTGGGAGCGCGAATTATTCACAAGAGGGCTATTATACTTCCCAAGATCTAACCTCTCCCAAAAATGGAACTGGGAAGCAAGCAGGTCCTGTGCAACATTTTGTGAGTCCAGACTCGCCCTGGAATGGTCAGATATCTTTTAGCTATGAGCAGATTATGGAGATGACTCAGAGATTTTCTAGTGAAAATATTTTAGGGGAGGGGGGATTTGGATGTGTGCACAAGGGTTGGCTTTCAGATGGAAAAGAAGTTGCTGTAAAGCAGCTAAAAGCGGGCAGCGGCCAAGGTGAACGGGAATTTAGGGCGGAGGTTGAGATTATCAGCCGTGTTCATCATCGGCATTTGGTATCTTTAGTTGGCTATTGCATAGCTGATCACCGAAGAGTGCTTATCTATGAGTTCCTTCCCAATAAAACTCTTGAATATCACTTGCATGCCAGAGGAGTGAAAGTCTTAGATTGGGACATGAGGATGAAGATTGCAATTGGCTCTGCAAAAGGCTTAGCATATTTGCATGAAGACTGCACCCCAAAAATTATCCACAGAGATATTAAGTCAGCGAACATACTTTTGGATAATGCGTTCGAGGCAAAGGTTGCAGACTTTGGACTTGCTAGGCTACACGATGATGCTAACACGCACGTATCAACTCGGGTTATGGGGACTTTTGGGTACTTGGCTCCAGAGTATGCAACAAGCGGAAAATTGACGGATAGATCAGATGTTTTCTCCTTTGGAGTTGTCCTCCTTGAACTTATAACAGGGAGGAAACCTGTCGATCAAACTCGGCCTTTGGGAGAAGAGAGTTTGGTTGAGTGGGCTCGTCCACTTCTCCATCGGGCCATTGAGACCCGAGACTTCAATGAATTAGCGGACAAAAGGCTCAACATGCAATTTGTGGAGAGCGAGATGAGCAGCATGATTGGAGCTGCCGCAGCTTGTGTTCGCTATTCTGCTCCAAAACGGCCTCGTATGGTTCAGGTGGTTAGAGCATTGGATAGTCGAAATGGATCATATGATTTATCAAATGGTGTTAAATATGGTCAGAGCACTATTTATGATTCCAGCAACTACAGTGACGACGCTATTATGAAGTTCATGAATATGGCCATAGATAGCTGTAGGGAATCTGGATTTGATAGGGACAGTAGAGAAAGCTCTTCTTCAGTAGAGCTTTCTGGACAACAACATTCATGGCTCAAGGGTGCTTCAAGTGGTGAGTCAGAGTCCCGGGCTTTCAATGCAAGAAGAAGGACCTAG 2421 0.4779 MKKLEIKKFKDALVKYRNERCSLGPTRGLDETELEKLVMGGELAAESALLYSMEKKNHFCIDIKLSKGWTPNQGRFRLAGCSRNRVGKFLISVSEMASRRSNVDSDSKSSEISYSSKLSAEDAAPSPDSPSSSNSTDSTPPISPSTSPPSRSPPPTISPPPSPSPPPSSPQYSPPPPSSPPPEQSPPPPSLPPPPSRPPPSSPPPELPSPSPPPQSQSPPPPDQSSPPPFSPPTPPSSPPLSQNPSTPLTPASPNNSSATGNPLPPPSTVVPPAVATVPPNIPSSPPPPWVWPPPPLPQSPSTTSSSGSSSGSTLHSSSRDSNSGGNLNNYIGYVMAGVFGFILLAILIVFAVRKKRKGKVAHVTHFGAANNLYNKPGTEGSYYAQQSGSANYSQEGYYTSQDLTSPKNGTGKQAGPVQHFVSPDSPWNGQISFSYEQIMEMTQRFSSENILGEGGFGCVHKGWLSDGKEVAVKQLKAGSGQGEREFRAEVEIISRVHHRHLVSLVGYCIADHRRVLIYEFLPNKTLEYHLHARGVKVLDWDMRMKIAIGSAKGLAYLHEDCTPKIIHRDIKSANILLDNAFEAKVADFGLARLHDDANTHVSTRVMGTFGYLAPEYATSGKLTDRSDVFSFGVVLLELITGRKPVDQTRPLGEESLVEWARPLLHRAIETRDFNELADKRLNMQFVESEMSSMIGAAAACVRYSAPKRPRMVQVVRALDSRNGSYDLSNGVKYGQSTIYDSSNYSDDAIMKFMNMAIDSCRESGFDRDSRESSSSVELSGQQHSWLKGASSGESESRAFNARRRT 806
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco11g1028 806 FunFam proline-rich receptor-like protein kinase PERK8 522 734 - -
Acco11g1028 806 MobiDBLite consensus disorder prediction 107 141 - -
Acco11g1028 806 Gene3D Transferase(Phosphotransferase) domain 1 522 734 - -
Acco11g1028 806 ProSitePatterns Protein kinases ATP-binding region signature. 452 474 IPR017441 GO:0005524
Acco11g1028 806 PANTHER PROLINE-RICH RECEPTOR-LIKE PROTEIN KINASE PERK4 345 756 IPR047117 -
Acco11g1028 806 MobiDBLite consensus disorder prediction 142 247 - -
Acco11g1028 806 MobiDBLite consensus disorder prediction 97 325 - -
Acco11g1028 806 SMART serkin_6 446 787 IPR000719 GO:0004672|GO:0005524|GO:0006468
Acco11g1028 806 ProSiteProfiles Protein kinase domain profile. 446 787 IPR000719 GO:0004672|GO:0005524|GO:0006468
Acco11g1028 806 MobiDBLite consensus disorder prediction 775 797 - -
Acco11g1028 806 MobiDBLite consensus disorder prediction 265 301 - -
Acco11g1028 806 FunFam Proline-rich receptor-like protein kinase PERK8 420 521 - -
Acco11g1028 806 SUPERFAMILY Protein kinase-like (PK-like) 423 719 IPR011009 -
Acco11g1028 806 MobiDBLite consensus disorder prediction 302 325 - -
Acco11g1028 806 Pfam Protein tyrosine and serine/threonine kinase 449 719 IPR001245 GO:0004672|GO:0006468
Acco11g1028 806 CDD STKc_IRAK 452 720 - -
Acco11g1028 806 Gene3D Phosphorylase Kinase; domain 1 417 521 - -
Acco11g1028 806 MobiDBLite consensus disorder prediction 764 806 - -
Acco11g1028 806 ProSitePatterns Serine/Threonine protein kinases active-site signature. 566 578 IPR008271 GO:0004672|GO:0006468
Acco11g1028 806 PRINTS Proline rich extensin signature 166 183 - -
Acco11g1028 806 PRINTS Proline rich extensin signature 123 144 - -
Acco11g1028 806 PRINTS Proline rich extensin signature 148 164 - -
Acco11g1028 806 PRINTS Proline rich extensin signature 187 212 - -
Acco11g1028 806 MobiDBLite consensus disorder prediction 248 264 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco11g1028 Acco-ChrAcco11 22484855 22494006 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco11g1028 322 796 Trihelix Transcription Factor Family AT1G70460 60.412 0.0 551
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_PERK-1 Acco11g1028 PK_Tyr_Ser-Thr 9.1e-47 CL0016