Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco11g1017 ATGTCTCAAAGAAAAGGATATAAGATTTTTGGTGTCACTATGGTGGCTCGCACAGAGGATCAAACACCAAAAGATGCCATGGATCAAGAAAATAATGAACAGAAACAAATTACTAGAACGAACGATGATGAAGATCAACATGGCCATCATGATGATTCTAATAATGATGATTTCGTCATCTTTGAACCGCCTCCAGAATTGGATTTGACTCTATCAATGACATTGCCATGGAGACTGAAGAATAAAATAGAGGATATGGGAGGCCATGATATTAGAAAGATAATACAAAAGAAGCTTTGTGAAAGTGATGTGAATGCAAACAATAATCGCTTCTCATTCCCGGAGAACAAGATATACGACAAAGATTTTCTAAAACCTCAAGAATTTGAGGTCTTGAATTCAACTCTTGATAACAGGCCTCAAGGCATAGAAGTGTTGGTGTTGGATTCAAGTCTTCAAGAGTTTAAATTAATTCTGAAGAGGTGGCAAATGAAGAGTTGTTTTATTTATAATCTCACCCGTAGTTGGAGAGATCTTGTGCAATCTAATAATTTGAAGAAGGGTGACGAGCTGCAATTATGGTCCTTTAGATGGCTCGATGGAATGCTCGAGGAGCAACTAGGATTTGCAATTGCAATGCCATTTTTCAATTATAACATCGACGCTTCGGCTGAAGAGAGAAACAAATGA 690 0.3739 MSQRKGYKIFGVTMVARTEDQTPKDAMDQENNEQKQITRTNDDEDQHGHHDDSNNDDFVIFEPPPELDLTLSMTLPWRLKNKIEDMGGHDIRKIIQKKLCESDVNANNNRFSFPENKIYDKDFLKPQEFEVLNSTLDNRPQGIEVLVLDSSLQEFKLILKRWQMKSCFIYNLTRSWRDLVQSNNLKKGDELQLWSFRWLDGMLEEQLGFAIAMPFFNYNIDASAEERNK 229
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco11g1017 229 Pfam B3 domain-containing protein At2g31720-like 75 181 IPR005508 GO:0003677
Acco11g1017 229 PANTHER B3 DOMAIN PLANT PROTEIN-RELATED 50 211 IPR005508 GO:0003677
Acco11g1017 229 MobiDBLite consensus disorder prediction 17 59 - -
Acco11g1017 229 MobiDBLite consensus disorder prediction 21 57 - -
Acco11g1017 229 CDD B3_DNA 93 197 IPR003340 GO:0003677
Acco11g1017 229 SUPERFAMILY DNA-binding pseudobarrel domain 93 198 IPR015300 -
Acco11g1017 229 Gene3D - 85 206 IPR015300 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco11g1017 Acco-ChrAcco11 22383568 22384257 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco11g1017 77 215 B3 DNA Binding Superfamily AT1G05930 34.459 2.28e-20 85.9