Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco11g1007 ATGAGGCGGACAGCGAGCTCTGATGCAATGAAGTTTCAAAGGAAAAACTGCTTCATGCTCTTTCTTTTCTGCATTACACTTGATCAAGCTTGTTCTCAAACTTCTTCAGCTTCTGGTTGCATCCTTGACATCCAATCTTCTACATCCTTAAATAATACAAACTCTGATTGTGAATTACACAGCTGGGGAGGGTTTATAAATAGCTGTTGTGCATTAGATTTTAATGGTTACCTTTATGCATTAGGCATGCATGCCAATCTATCTGGAAAAATATACTTGAATTCATCAGATCAAGAAACTTGCCTCACATCGATGAATATTGAAGGATGTGGTGTGGAGAAGCTAAGTACTGCAGCTGGTGGTTGCTCTGAATTCTCTGTCATAGATGTTATGGACAAACTGGGAGACAACTTGAGAAGATTAGATGAAGATTGTATGCCTTTGAGCAAGAATGGAAGAGAAAATGAGACTTGTACGGCGTGTTTGAGCAGGTGGGAGGAGATTGGCGCGATGTCAGACGGTAAAATGGAGTCAGGATCTGCAGATTTGGATGCTAATCTTTGTAGGTTTGCGGTACTAATCTCACTTACAAGCATCAGACTTTCTGATAGGGTGTCAATTCAGGAAGTTTATGAATGCCTTGGAACCTACAGCCTCGAGAAAAATCAGCAAGAAAGAAAAACTGATGGCAATTCTAAGCTCATCTTACGTCTCTGGATATTACCTTTTGGCATAATTGGAATCATAGTCATAGGGTTTCTTGTAGCATGGACCTTGAATAGAAGAAGAACTAGAAGTCCCCCGCCAAAACAAGAGTACGATAATTCAAGCCCTCTTAAGATAACTATCGAGGAAGTTTATACAGCGACCGACCATCTTAATGCTTCAAATTATATTGGTCAAGGCATAGCTGGAAAAGTGTACAAAGGTATACTTTCCAACGGTCAGCATGTAGCCATCAAGCATATCGTCGGCGAAGCATACTTAGAGACATTTGTTAGAGAAGTGAGTAGCCTTTCCCATGTCAGACATCAAAATTTAGTATCTTTGGTTGGATACTGTGAAGATGAAGGTGAATGCTTCCTGGTGTATGAGCTATGCCATGGAGGGAACCTCTCAGATTGGCTGTTTGGCAAAGATAAAGTTCTTTCATGGGTTCAGAGACTTAAGATTGCTGTTGATTGTGCAAGAAGTCTAATGTTTCTCCACACCTATCCAGGTGGCTGCATTATTCACCGTGACATTAAGCCATCAAACATTCTAATTGACACCAACATGCAAGCAAAGCTTTCAGACTTTGGACTGTCCAAGGTAATGGACCTTGGCCAATCGTTTGTGAGCTCTGAGGTGAGAGGAACATTAGGTTACATCGATCCTGAATACCGGAAAAATCGCCACGTAAAAGCCTCCGGAGATGTCTACAGTTTTGGAATAGTTTTACTGCAACTTCTTTCAGGACAGAAGGTCATTAACTTCGATTTCCAGAGACCAATGTCCCTGTATAAAATGGCTAGAAATTTTGCTACAGATGGGAATATATCAGAGTTTGCTGATCCTAAACTCAGAGGAGATTACTCTGAAGAAGCATTTAGCGTCACATTAAAGCTCGCCGTTTCGTGCATAGGGCTTAAGCAGCAACGGCCATCGATAGAGCAAGTGCTACGCAACCTAGAGAAGGCTCTGGAAATCACATCACAATTCACATCTTTCACAGTGTAA 1719 0.4136 MRRTASSDAMKFQRKNCFMLFLFCITLDQACSQTSSASGCILDIQSSTSLNNTNSDCELHSWGGFINSCCALDFNGYLYALGMHANLSGKIYLNSSDQETCLTSMNIEGCGVEKLSTAAGGCSEFSVIDVMDKLGDNLRRLDEDCMPLSKNGRENETCTACLSRWEEIGAMSDGKMESGSADLDANLCRFAVLISLTSIRLSDRVSIQEVYECLGTYSLEKNQQERKTDGNSKLILRLWILPFGIIGIIVIGFLVAWTLNRRRTRSPPPKQEYDNSSPLKITIEEVYTATDHLNASNYIGQGIAGKVYKGILSNGQHVAIKHIVGEAYLETFVREVSSLSHVRHQNLVSLVGYCEDEGECFLVYELCHGGNLSDWLFGKDKVLSWVQRLKIAVDCARSLMFLHTYPGGCIIHRDIKPSNILIDTNMQAKLSDFGLSKVMDLGQSFVSSEVRGTLGYIDPEYRKNRHVKASGDVYSFGIVLLQLLSGQKVINFDFQRPMSLYKMARNFATDGNISEFADPKLRGDYSEEAFSVTLKLAVSCIGLKQQRPSIEQVLRNLEKALEITSQFTSFTV 572
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco11g1007 572 ProSitePatterns Serine/Threonine protein kinases active-site signature. 410 422 IPR008271 GO:0004672|GO:0006468
Acco11g1007 572 SUPERFAMILY Protein kinase-like (PK-like) 268 557 IPR011009 -
Acco11g1007 572 Pfam SPARK 35 174 IPR043891 -
Acco11g1007 572 FunFam probable receptor-like protein kinase At5g59700 367 571 - -
Acco11g1007 572 Pfam Protein kinase domain 297 555 IPR000719 GO:0004672|GO:0005524|GO:0006468
Acco11g1007 572 Gene3D Transferase(Phosphotransferase) domain 1 368 569 - -
Acco11g1007 572 ProSiteProfiles Protein kinase domain profile. 293 561 IPR000719 GO:0004672|GO:0005524|GO:0006468
Acco11g1007 572 Gene3D Phosphorylase Kinase; domain 1 255 366 - -
Acco11g1007 572 PANTHER LEUCINE-RICH REPEAT RECEPTOR PROTEIN KINASE EMS1 186 562 - -
Acco11g1007 572 SMART serkin_6 293 561 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco11g1007 Acco-ChrAcco11 22176980 22180596 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco11g1007 281 568 Receptor kinase-like Gene Family AT4G39110 39.932 4.75e-58 206
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_URK-2 Acco11g1007 Pkinase 9.2e-43 CL0016