Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco11g1004 ATGCAGGTATTGAAAGAGAGCTTTAAGATATATTGTGCTATTAAAGATGGAATTATCAATCTTACCAATAAGTTTTTTGAGATGCCCAGACGTGAGGCAATTACAGCCTTTGATATCTATAAACGTGCTGATCAAAAGGCAATTGAAGATTCCTTGAGAATGGATGATGGTTTCTTGAAAATGGATGATAATCAGATACAATTATCACCTGATAACCGTTTTCTTGATGATCTTCTAAATTCTTTCAACGAGTTCACCGATTATGAAGTTGAGTTTGTAACAAACCCTACCCAAGATTCAATTCAAGATTGCTCTGCCTTGCCGGAGGAGGTAGTTGAAGATTCTATTCCAATGGATGGAGGTGTCCCGCCATTACCCTCTACCGGTGATGAGCTCACAACAAATCCTCAATCAGATTCAGCACACCATCACCATATCATAGTGAAGACATCAAGCAAGCGATGCGGATGTAAGGCCAGCAAATGTCAACAGCGTTATTGTGGATGTTATGCTGCTGGAGAATTATGTGGCGAAAATTGTAGCTGCCAAGGTTGTTTTAACAAGTCAGAATATGATGCAACAAAGCCAAGGAACAACAATATGTGTCATAATCCGCAGGCAATGTCTGGAGCACCCACCCCAAATCCAATTACTCCACATGCGATTGTCCAAATAGACTCTGTCGCTCACCCGCAAGCAAATTCATTTACCACCTCAAGCAACATTATCTCTCCACCACAGGCAGTGCAAATGGCTGCCATGGCTCAGCTATGGGCGAATCCATTTACCACATCAAGCAACATCTCTCCACCACAAGCAGTGCAAATGGCTGCCATGGCTCAGCTACAGGCGAATCAATTTACGACATCAAGCAGGATTTCTCCACCACAGGCAGTCCAAATGGCTGCCATGGCTCGATTGCAAGCAGATCCCATTATAACTTATTATCAACCTCAGCAGCAACATATAATGATGTACCCAGCCAATCCACAACAAATGGGTCATAGGGTGTTGTCTGTGAATGCTGGTTCTAGATCACCATTAATGCGAATACCTCCAAGGCTCCGTCAGGAAGCCCACAAGATTTGGAAGCAGCTACCAAGAAAATAA 1110 0.4297 MQVLKESFKIYCAIKDGIINLTNKFFEMPRREAITAFDIYKRADQKAIEDSLRMDDGFLKMDDNQIQLSPDNRFLDDLLNSFNEFTDYEVEFVTNPTQDSIQDCSALPEEVVEDSIPMDGGVPPLPSTGDELTTNPQSDSAHHHHIIVKTSSKRCGCKASKCQQRYCGCYAAGELCGENCSCQGCFNKSEYDATKPRNNNMCHNPQAMSGAPTPNPITPHAIVQIDSVAHPQANSFTTSSNIISPPQAVQMAAMAQLWANPFTTSSNISPPQAVQMAAMAQLQANQFTTSSRISPPQAVQMAAMARLQADPIITYYQPQQQHIMMYPANPQQMGHRVLSVNAGSRSPLMRIPPRLRQEAHKIWKQLPRK 369
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco11g1004 369 Pfam Tesmin/TSO1-like CXC domain, cysteine-rich domain 153 188 IPR005172 -
Acco11g1004 369 SUPERFAMILY GAT-like domain 2 45 - -
Acco11g1004 369 Pfam ANTH domain 1 46 IPR011417 GO:0005543
Acco11g1004 369 MobiDBLite consensus disorder prediction 124 145 - -
Acco11g1004 369 PANTHER CLATHRIN ASSEMBLY PROTEIN 1 52 IPR045192 GO:0048268|GO:0072583
Acco11g1004 369 SMART CXC_2 150 191 IPR033467 -
Acco11g1004 369 ProSiteProfiles CRC domain profile. 151 208 IPR005172 -
Acco11g1004 369 Gene3D ANTH domain 1 64 IPR014712 GO:0005545|GO:0030136|GO:0030276|GO:0048268
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco11g1004 Acco-ChrAcco11 22079701 22085117 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco11g1004 151 228 CPP Transcription Factor Family AT3G04850 37.179 2.35e-10 60.1
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF CPP Acco11g1004 ANTH 3.5e-10 CL0009