Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco11g0990 ATGGCATCAAGATCATTTGCTAATCTCTTAGACTTGGTTAGTGGAGGTTTATTGGATGTTCCTCACACCCCAAGAGCTCTTCCAAGAGTTATGACAGTTCCTGGAGTCGTTTCTGACCTAGATGGTCATGGTAATAATGATGTAGATTCAGATGTTAGCTCGTCTGGGTGTCAGGAGCGGAAAATAATAGTGGCAAACATGCTGCCATTGCAGGCTAAAAGAGATCCAGAATCTGCTAAATGGTGTTTCAGTTTGGATGAGGATTTGATTTTATTACAATTGAAAGATGGTTTTTCTCCAGATACTGAGGTTATCTATGTGGGTTCTCTGAAAGTTGAAATAGATGCCAGTGAGCAGGACGAAGTTGCTCAGAAACTACTGGAGGATTTCAATTGTGTACCTACCTTTTTACCACATGAACTCCAGAAGAGGTTTTATCTTGGCTTTTGTAAGCAGCAGCTTTGGCCCCTTTTTCATTATATGCTGCCTATGTGCCCTGATCATGGTGACCGCTTTGACCGTGTGCTTTGGCAAGCTTATGTTTCTGCAAACAAAATATTTGCAGACAAAGTCATGGAAATAATCAATCCTGATAATGATTTTGTTTGGGTTCATGACTATCACTTGATGATTTTGCCGACATTTCTTCGGAAGCGATTTCATGGTGTTAAACTTGGATTCTTCCTTCACAGTCCTTTCCCATCATCCGAGATTTACAGAACTCTGCCAGTGCGAGATGAAATTCTGAGAGGACTGTTGAATTCAGACTTAATTGGTTTTCATACATTTGATTATGCTCGCCACTTCCTCTCTTGCTGCAGCAGAATGCTGGGTCTGGACTATGAATCTAAGCGGGGACATATAGGTCTTGATTACTTTGGCCGCACTGTATATATTAAAATTTTGCCTGTTGGCATTCACATGGGCAGGCTTGAATCTGTATTAAATCTTCCTTCTACATCTGCTAAAATAAAAGAGATTCAGGAAGAGTTTAAGGGCAGGAAGATGATTCTTGGTGTCGATGATATGGATATCTTCAAGGGCCTCAATTTGAAACTTCTAGCCTTGGAGCAGCTGCTGCAGCAGAACCCAGACTTGCTGGGAAAGATCGTCCTAGTTCAAATTATAAATCCTGCAAGGGGTTCAGGGAAGGATGTTCAAGAAGCAAAGAAGGAAACAAATTTGATTGCCCAAAGGATCAATGATACATATGGCTTGAAACATTATCAGCCAGTTGTTCTCATTGACCGTCCTGTTCCTCGTTTTGAAAAGAGTGCCTATTATGCTGTAGCAGAGTGTTGTATTGTCAATGCTGTGAGGGATGGTATGAATTTAGTCCCGTACAAATATGTTGTCTGCAGGCAAGGAACTGCTCAACTGGACAAAGCATTGGGCAGAAAAAGTGATTCCCCTCGGACTGGCATGCTTGTGGTCTCTGAGTTCATTGGCTGTTCCCCTTCTCTAAGTGGAGCAATTAGGGTCAATCCCTGGAATATTGATGCAGTTGCTGATGCAATGTATGTGGCCATTATGACGTCTGATTCAGAGAAGCAATTGAGGCATGGGAAACACTATCGATATGTCAGTTCTCATGATGTGGCTTATTGGGCCCGAAGCTTCATGCAGGACCTAGAGAGGGCATGCGAAGATCATTACACCAAAAGGTGGTGGGGAATTGGTTTGGGCCTAAGGTTCAGAGTTGTTTCTCTTTCTCCTGGTTTTAGGAGGTTGTCCATTGACCATGTCGTTTCAGCTTATAAAAGAACTCATAAAAGGGCCATATTTCTTGATTATGATGGTACAATCGTACCACACTCTTCTATAAATAAAACCCCCAGCTCTGAAGTCATATCTGTGCTGAATACCCTGTGTAATGATGCCAAGAACATTGTGTTCATTGTTAGTGGAAGGGGAAGAGATTCTCTTAGTGAGTGGTTTACTTCATGCAAGAGGCTGGGACTTGCGGCCGAACATGGTTACTTTTTAAGGTGGAATGGAGACTCAGAATGGGAAACCAGCCACTTGTCTGCTGACCTTGAATGGAAAAATATAGTGGAGCCTGTCATGACTTCATATACAGCGGCAACTGATGGGTCTAACATTGAAACTAAAGAAAGTGGTTTGGTGTGGCATCATCAGGATGCAGACCCTGATTTTGGATCCTGCCAAGCTAAAGAGTTGTTGGATCACCTGGAAAGTGTGCTTGCTAACGAACCAGCTGTCGTTGCAAGGGGACATCATATTGTGGAAGTCAAGCCACAGGGAATAAGCAAGGGTTTAGTAGCGGAGCAGGTTCTCTCGAAGCTGGCAGATGGCGGGAACCTGCCAGATTTTGTGATGTGCATTGGAGATGACAGGTCGGACGAAGACATGTTTGAGAGCATATCGAGGGTGTCTTGTCCTCCATTGCCAGTTGCTCCGGAGGTGTTTGCTTGCACTGTTGGTAGCAAGCCTAGCAAGGCAAAGTATTATCTTGATGATTCTGCTGATGTTATAAGATTGCTTAAAGGCCTTGCAACTGCATCAAATCCAATGCCTAGGAATCCACCCCAGTTCAAGGTTTCTTTTGAAAGCACAGCTTGA 2583 0.4328 MASRSFANLLDLVSGGLLDVPHTPRALPRVMTVPGVVSDLDGHGNNDVDSDVSSSGCQERKIIVANMLPLQAKRDPESAKWCFSLDEDLILLQLKDGFSPDTEVIYVGSLKVEIDASEQDEVAQKLLEDFNCVPTFLPHELQKRFYLGFCKQQLWPLFHYMLPMCPDHGDRFDRVLWQAYVSANKIFADKVMEIINPDNDFVWVHDYHLMILPTFLRKRFHGVKLGFFLHSPFPSSEIYRTLPVRDEILRGLLNSDLIGFHTFDYARHFLSCCSRMLGLDYESKRGHIGLDYFGRTVYIKILPVGIHMGRLESVLNLPSTSAKIKEIQEEFKGRKMILGVDDMDIFKGLNLKLLALEQLLQQNPDLLGKIVLVQIINPARGSGKDVQEAKKETNLIAQRINDTYGLKHYQPVVLIDRPVPRFEKSAYYAVAECCIVNAVRDGMNLVPYKYVVCRQGTAQLDKALGRKSDSPRTGMLVVSEFIGCSPSLSGAIRVNPWNIDAVADAMYVAIMTSDSEKQLRHGKHYRYVSSHDVAYWARSFMQDLERACEDHYTKRWWGIGLGLRFRVVSLSPGFRRLSIDHVVSAYKRTHKRAIFLDYDGTIVPHSSINKTPSSEVISVLNTLCNDAKNIVFIVSGRGRDSLSEWFTSCKRLGLAAEHGYFLRWNGDSEWETSHLSADLEWKNIVEPVMTSYTAATDGSNIETKESGLVWHHQDADPDFGSCQAKELLDHLESVLANEPAVVARGHHIVEVKPQGISKGLVAEQVLSKLADGGNLPDFVMCIGDDRSDEDMFESISRVSCPPLPVAPEVFACTVGSKPSKAKYYLDDSADVIRLLKGLATASNPMPRNPPQFKVSFESTA 860
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco11g0990 860 CDD GT20_TPS 60 545 IPR001830 GO:0003824|GO:0005992
Acco11g0990 860 FunFam Trehalose-6-phosphate synthase 2 675 754 - -
Acco11g0990 860 FunFam alpha,alpha-trehalose-phosphate synthase [UDP-forming] 6 591 708 - -
Acco11g0990 860 Pfam Glycosyltransferase family 20 60 545 IPR001830 GO:0003824|GO:0005992
Acco11g0990 860 FunFam alpha,alpha-trehalose-phosphate synthase [UDP-forming] 6 53 312 - -
Acco11g0990 860 CDD HAD_TPP 593 833 - -
Acco11g0990 860 NCBIfam trehalose-phosphatase 590 839 IPR003337 GO:0003824|GO:0005992
Acco11g0990 860 Gene3D - 591 701 IPR023214 -
Acco11g0990 860 Gene3D - 721 848 IPR023214 -
Acco11g0990 860 SUPERFAMILY HAD-like 592 839 IPR036412 -
Acco11g0990 860 PANTHER TREHALOSE-6-PHOSPHATE SYNTHASE 28 840 IPR001830 GO:0003824|GO:0005992
Acco11g0990 860 Gene3D Glycogen Phosphorylase B; 53 312 - -
Acco11g0990 860 NCBIfam HAD-IIB family hydrolase 593 794 IPR006379 -
Acco11g0990 860 SUPERFAMILY UDP-Glycosyltransferase/glycogen phosphorylase 60 549 - -
Acco11g0990 860 FunFam Alpha,alpha-trehalose-phosphate synthase [UDP-forming] 6 721 851 - -
Acco11g0990 860 Gene3D Glycogen Phosphorylase B; 313 529 - -
Acco11g0990 860 FunFam Alpha,alpha-trehalose-phosphate synthase 314 529 - -
Acco11g0990 860 Pfam Trehalose-phosphatase 595 828 IPR003337 GO:0003824|GO:0005992
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco11g0990 Acco-ChrAcco11 21813794 21817354 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco11g0990 1 860 Trehalose Biosynthesis Gene Families AT1G60140 72.822 0.0 1347
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Acco11g0990 11 21813794 21817354 Acco11g0990 11 21813794 21817354 ECH