Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco11g0962 ATGTCACATGAAGATTTTCAAAATATCGTGGTCCCATCCTCTGTTAAAATGCTGAAGCGAAACCCAGAGATGGTGTTGGAATCTGTTGGAATTCTTTTGAAGTCTGTTAATCTTGATTTGAGCAAGTATGCTATGGAGATTCTTCTGGTGGTATTAGCACAGGCCAGGCATGCTGATGAAGGGAGGCGGGATGGAGCATTAGCTATAGTCAAGAGTTTAAGCCAGAAGTCTAGCAACCCAGATGCTTTAGAAGCAATGTTTAATGCTGTCAAAGCTGTTATTAAGGGCTCTGAAGGAAGACTAGCATTTCCATATCAGAGAGTTGGGATTTTGAATGCAATACAAGAATTATCTTATTCAGCAGATGGGAAACACCTCATCAGCCTGTCACGTACAATATGCGGTTTTCTTTTATCATGCTACAAGGATGATGCTAGATCTGTAGATTTGATTGAAGACAGTACAGTTGCCTTTTTTATTTCTGGTCACAAAGAGAAGGAATCATTAAGAAGGGCATTCCTACGTTGTCTTCATGCTGTTTACAAAAATGCGGATGCTGCCATGGAGGTGGCTGATCATATGTCATTGTTGCTGGGACCTCTTATCCAACTTGTAAAATCTGGTTTTACCAAGGCAGTGCAACGATTGGATGGAATATATGCATTGCTATTAGTTGGGAAGATAGCTGCTGTTGATATTAAAGATGAGGAAACGTTATTGAAGGAAAAGATATGGTCTGTGGTATCCCAGAATGAGCCTTCTGTCGTGCCAATTTCCATGGCTTCAAAGTTGTCAGTTGAGGATTGCATGGTGTGTGTTGAACTTCTTGAAATGTTACTTATGGAACATTTACAGCGAGAATTCCGATTAATGACTATGAAACTGCTTCCAGGTGAAATAGTTTTCCCTCTTTTTGTGTTCATACTATTCTGCCAATGTTTCTTGGTATGTATCGCAGAAGATTGTGGAGGGAAGGCAATTGCACATACTATTACTGTTGGTCAATCTGGTGAGTTCAAAACAGTTCAAGCAGCAATTGATTCAATAGAAAGTAACAACGCTCAGTGGGTCAAAATTCACATACATCAAGGCAAATACAGAGAGAAGGTGCAGGTTCCAAGAGACAAACCATGTATCATTTTGGAAGGTGAAGGCAGGGGGGTTACCACAATTACGTACAGTGACCATCAACAAACAGATACTAGCGCCACGTTCTCTTCATCTGCAAACAATATAATTGCAGTTGGAATCAGCTTTGAGAACTCGCTTAATTTGCCCAAGGAATCAAAATTGGACCAAATCATAAGTGGAAAAGGTGTGACAGCACCAGCATTGGCAGCCAGAATATATGGTGATAAATCAGCTTTTTTAGATTGTGGCTTCTTGGGTTTTCAAGATACACTTTGGGATGTTCAAGGTCGTCATTACTATAAGAATTGCTATATCCAAGGTGCTGTAGACTTCATCTTTGGCAGTGGTCAGTCCTATTTTGAGAATTGTTTGATCAACGCGGCGTTAACTACATCGAAGGCTCAAGTTCCTCATGGTTATATAACAGCACAAGGACGAAGTTCAAAGGATGAGACTAGTGGCTTTGTATTTAGAGGTGGGAAAGTTGTGGGAAGTGGTCCAGTTTTTTCTGGGGAGAGCTTATGGTCCTTATTCTAG 1668 0.4059 MSHEDFQNIVVPSSVKMLKRNPEMVLESVGILLKSVNLDLSKYAMEILLVVLAQARHADEGRRDGALAIVKSLSQKSSNPDALEAMFNAVKAVIKGSEGRLAFPYQRVGILNAIQELSYSADGKHLISLSRTICGFLLSCYKDDARSVDLIEDSTVAFFISGHKEKESLRRAFLRCLHAVYKNADAAMEVADHMSLLLGPLIQLVKSGFTKAVQRLDGIYALLLVGKIAAVDIKDEETLLKEKIWSVVSQNEPSVVPISMASKLSVEDCMVCVELLEMLLMEHLQREFRLMTMKLLPGEIVFPLFVFILFCQCFLVCIAEDCGGKAIAHTITVGQSGEFKTVQAAIDSIESNNAQWVKIHIHQGKYREKVQVPRDKPCIILEGEGRGVTTITYSDHQQTDTSATFSSSANNIIAVGISFENSLNLPKESKLDQIISGKGVTAPALAARIYGDKSAFLDCGFLGFQDTLWDVQGRHYYKNCYIQGAVDFIFGSGQSYFENCLINAALTTSKAQVPHGYITAQGRSSKDETSGFVFRGGKVVGSGPVFSGESLWSLF 555
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco11g0962 555 SUPERFAMILY Pectin lyase-like 326 547 IPR011050 -
Acco11g0962 555 ProSitePatterns Pectinesterase signature 2. 482 491 IPR033131 -
Acco11g0962 555 Gene3D - 319 551 IPR012334 -
Acco11g0962 555 Gene3D - 2 238 IPR011989 -
Acco11g0962 555 Pfam Pectinesterase 334 542 IPR000070 GO:0030599|GO:0042545
Acco11g0962 555 SUPERFAMILY ARM repeat 4 280 IPR016024 -
Acco11g0962 555 PANTHER ACYL-COA THIOESTER HYDROLASE YBHC-RELATED 325 548 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco11g0962 Acco-ChrAcco11 21062191 21069778 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco11g0962 305 550 Carbohydrate Esterase AT2G19150 44.094 1.06e-57 192