Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco11g0943 ATGGATAGTCCTACTGCAATTCAGCCTTCTACACCTGGTTCTGTACTGGGTTCGGTGCCTGTTTGCAACGATGATACCCAGCGGGTTAAATTCTTGTGTAGCTTTCTTGGTAATATAATGCCTCGTCCTCTAGATGGCAAGCTTCGCTATGTTGGCGGAGAGACACGAATTGTGAGTGTTCCACGAGATATTGGCTTTGAGGAGTTGATGAGTAAGATGAGGGAGCTGTATGATGAGGCAGCAATCTTAAAGTACCAGCAACCTGACGAGGATCTTGATGCCCTTGTCTCTGTTGTGAATGATGATGACGTGGTTAATATGATGGAAGAGTATGACAAATTAGGTTCAAGTGATGGATTTACTAGGCTCAGAATCTTTTTGTTCTCACAAGCTGAACAAGATATTTCTTCACATTTCATTGATGGGGATGAGAGGGATACTGAGAGAAGGTATGTTGATGCATTGAATAATTTAAACGATGCTTCGGATTTTATGAAGCAGCAACTAGGTGAGTTTCCTATGGTTGGTTCGGTTGAGGATATGCATGGAGCTGATCAGTTCTTTAATCCAATCAGCGTGGATGCTGGCCTTCATAGCCAGAGAAGTGGTGAGGTGCCCATGACACATTTTAACTTGCATCATCCCTCACTACCTCACATTGCATCTGGGCAACACCAGCAACCTGTATCCCAGAGGTATAGTGACGCAGATGCACCATGGAGTCCTGCATATTACTCTCCTAGGCATCATGGTCACCATGACTCTAGATCAGTGGTAGAATTTCCATCTTCTCCTTCTTCCGCAAGGTATCAGATGCCATTTTCAGAGCTGCCAGATAAATGTCTTGATAGAATGCCAGAAGAATATACGCGGCATCAGGTAAATCACCATTCCGTGTATGACAATCAACCACAATATTCCGATAATGTTGTGTGGTATGCAACTGGACCTACATCTACTGAGAAGTCCGGTTTTCCTGGCAATATTATGCATGGCCCTCATGCTGTTGATGGGAATGGTATTTGTGAGCTCTGCCGAATGAATTTTCAGAGAAGTCAATCTCCTTTTGAGCACCCAAATATTAGTAATGGACTTCACCCAGTTGCTAATCCAGATGTGAAGTTGCATCCGGTTATGTATCCTAATGAGCCAAATTTGCCGCATCAGACAAATAATCGGACTGAGGAAGCAAGGAGCCATGTTTCTGGGTCTGGAAGACTGAATGATCATTATGTTCATGAGGCTCCTGGTATAAGTTTCTCTCTTGGGCACGGCAGTGTGGCTGACGGACATCATTTGCCTTCAAATTATGTTCACCAAAGAGTTGGTCCTGAATTGGGGCCTGAGCTGTTTCATGATCAAGTTATGGCTACTACAGCCCATCCACAAATTCCACCTTCGGAAGAACGCAGTGGGCGGTATGGGAACTCACCTCCTTATGTAGTTGATAGTCATTACCCTGTGACACATGGACATGTACCTGGGCTTGCTTTTTGGAGAAATACTCCAGCTCCACTTCACATTGGACCATCTTATGAGGCATCCAGTCCATCTCAACAGTTAAATGGTGTGGTGAATGCAGGAATAAGGGGTGAGAGTAGTCCAAGAATTTACGTTGGACCAGATAGTCAAAGTCCTAGGGTTGATTCCTCACACAAAATGCCAGGTCATGATGGACTACCCATCCCAGAATTCCCTTATACTCATGCTGTGAAGTTCAATCCAAGGACTCTTGGTCAAGAAAATCAACACCCAATTGCTGTGGACGCCATTCGTTCCCCACAGGACATGAATGTTGGCATTCAATTGGAACCAGTGCGGCTACCAAAATCACCTTTTAATATGGCTCACAACAATGAGGTTTCAAACAATGGCACTTATATATCTGAAGCAATGGGGTTGCTGAGTTTGCATGAAGATAAAGGGGCAGAAAATGCAGACAAGGTTCAGAACTCTAATGCTCAAAGTATATCATTTTCTGAGCAAAACAAGATCTCTGAAAATAATAGTGAAGCCACTGCTTTTGTTGAGTCTAAAAATGCAAAATCAAAACCTATTGAAGAATGTGGTGATGTTGCAACAGTAGTAGATGGGGATCTAACTGTTCCTGAAGATTCCAAGTGTCTAGCTACTCAATTCAGTTTCTTGCCTGAGTTGATTGCTTCTGTAAAAAAGGCTGCATTGGAAGGAGCTGAAGAGGTGAAAGCAAGAGCTAAGGAGCACACCACTTCTCAGAGTCACAATTCAGCAATCAAAGATGACACAGCAAATGATGGAGAGTCAGGGAATGCTCATGTTGATTTAGAATTGGACTCCGATAATGACAATGTGATTACTTCTAAAATTGAGCCCACAAAAGCTGAGGCAGAAGCTATTGCTAGAGGATTGCAGACAATTAAAAATGATGATTTGGAAGAGATCCGTGAACTAGGTTCAGGAACTTATGGAGCTGTCTATCATGGGAAATGGAAAGGTTCTGATGTGGCAATTAAGAGGATAAAAGCTAGCTGTTTTGCTGGAAGGCCCTCGGAAAGAGAAAGATTGATTGCAGATTTCTGGAAAGAGGCATTAATACTAAGTTCACTTCATCACCCAAATGTTGTGTCCTTCTATGGTATTGTCCGTGATGGTCCTGACAGTTCTTTAGCAACTGTGACGGAGTTCATGATTAATGGATCCCTGAAACAGTTCTTGCACAAGAAAGATAGAACTATTGATCGCCGAAAGAGGCTCATTATAGCTATGGATGCGGCATTTGGGATGGAGTATTTACATGGAAAGAACATTGTGCATTTTGATTTGAAATGTGAGAATCTATTAGTCAATATGAGAGATCCGCAGCGGCCTGTCTGCAAGATTGGTGATTTGGGTTTATCAAAGGTAAAACAACACACTCTAGTATCTGGAGGGGTGCGGGGAACATTGCCTTGGATGGCACCTGAACTCCTAAGTGGTAAAAGCAATATGGTGTCTGAGAAGATCGATGTTTATTCATTCGGGATTGTTATGTGGGAACTGCTCACTGGGGATGAACCCTATGCTGATATGCATTGTGCTTCAATAATAGGAGGAATTGTGAACAACACATTACGTCCCCAAATCCCGACATGGTGTGATCCTGAGTGGAAGTCTCTGATGGAAAGTTGCTGGGCTTCTGATCCAGCTGAGAGGCCATCCTTCTCAGAAATCTCAAAGAAGCTAAGGAGTATGGCTGCGCAAATGAATGTGAAGTAG 3234 0.4323 MDSPTAIQPSTPGSVLGSVPVCNDDTQRVKFLCSFLGNIMPRPLDGKLRYVGGETRIVSVPRDIGFEELMSKMRELYDEAAILKYQQPDEDLDALVSVVNDDDVVNMMEEYDKLGSSDGFTRLRIFLFSQAEQDISSHFIDGDERDTERRYVDALNNLNDASDFMKQQLGEFPMVGSVEDMHGADQFFNPISVDAGLHSQRSGEVPMTHFNLHHPSLPHIASGQHQQPVSQRYSDADAPWSPAYYSPRHHGHHDSRSVVEFPSSPSSARYQMPFSELPDKCLDRMPEEYTRHQVNHHSVYDNQPQYSDNVVWYATGPTSTEKSGFPGNIMHGPHAVDGNGICELCRMNFQRSQSPFEHPNISNGLHPVANPDVKLHPVMYPNEPNLPHQTNNRTEEARSHVSGSGRLNDHYVHEAPGISFSLGHGSVADGHHLPSNYVHQRVGPELGPELFHDQVMATTAHPQIPPSEERSGRYGNSPPYVVDSHYPVTHGHVPGLAFWRNTPAPLHIGPSYEASSPSQQLNGVVNAGIRGESSPRIYVGPDSQSPRVDSSHKMPGHDGLPIPEFPYTHAVKFNPRTLGQENQHPIAVDAIRSPQDMNVGIQLEPVRLPKSPFNMAHNNEVSNNGTYISEAMGLLSLHEDKGAENADKVQNSNAQSISFSEQNKISENNSEATAFVESKNAKSKPIEECGDVATVVDGDLTVPEDSKCLATQFSFLPELIASVKKAALEGAEEVKARAKEHTTSQSHNSAIKDDTANDGESGNAHVDLELDSDNDNVITSKIEPTKAEAEAIARGLQTIKNDDLEEIRELGSGTYGAVYHGKWKGSDVAIKRIKASCFAGRPSERERLIADFWKEALILSSLHHPNVVSFYGIVRDGPDSSLATVTEFMINGSLKQFLHKKDRTIDRRKRLIIAMDAAFGMEYLHGKNIVHFDLKCENLLVNMRDPQRPVCKIGDLGLSKVKQHTLVSGGVRGTLPWMAPELLSGKSNMVSEKIDVYSFGIVMWELLTGDEPYADMHCASIIGGIVNNTLRPQIPTWCDPEWKSLMESCWASDPAERPSFSEISKKLRSMAAQMNVK 1077
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco11g0943 1077 ProSiteProfiles Protein kinase domain profile. 804 1071 IPR000719 GO:0004672|GO:0005524|GO:0006468
Acco11g0943 1077 FunFam Octicosapeptide/phox/Bem1p domain kinase superfamily protein 892 1077 - -
Acco11g0943 1077 SMART serkin_6 804 1071 IPR000719 GO:0004672|GO:0005524|GO:0006468
Acco11g0943 1077 Gene3D Phosphorylase Kinase; domain 1 789 889 - -
Acco11g0943 1077 MobiDBLite consensus disorder prediction 385 410 - -
Acco11g0943 1077 SUPERFAMILY CAD & PB1 domains 45 136 - -
Acco11g0943 1077 PANTHER SERINE-THREONINE PROTEIN KINASE 86 1070 - -
Acco11g0943 1077 FunFam Octicosapeptide/phox/Bem1p domain kinase superfamily protein 48 130 - -
Acco11g0943 1077 Gene3D - 47 131 - -
Acco11g0943 1077 CDD STKc_MAP3K-like 810 1067 - -
Acco11g0943 1077 CDD PB1_UP2 32 128 - -
Acco11g0943 1077 MobiDBLite consensus disorder prediction 735 768 - -
Acco11g0943 1077 Pfam PB1 domain 44 129 IPR000270 GO:0005515
Acco11g0943 1077 SUPERFAMILY Protein kinase-like (PK-like) 796 1065 IPR011009 -
Acco11g0943 1077 SMART PB1_new 43 128 IPR000270 GO:0005515
Acco11g0943 1077 MobiDBLite consensus disorder prediction 534 554 - -
Acco11g0943 1077 FunFam Octicosapeptide/phox/Bem1p domain kinase superfamily protein 797 891 - -
Acco11g0943 1077 Gene3D Transferase(Phosphotransferase) domain 1 890 1077 - -
Acco11g0943 1077 ProSitePatterns Protein kinases ATP-binding region signature. 810 831 IPR017441 GO:0005524
Acco11g0943 1077 Pfam Protein tyrosine and serine/threonine kinase 805 1067 IPR001245 GO:0004672|GO:0006468
Acco11g0943 1077 PRINTS Tyrosine kinase catalytic domain signature 1038 1060 IPR001245 GO:0004672|GO:0006468
Acco11g0943 1077 PRINTS Tyrosine kinase catalytic domain signature 994 1016 IPR001245 GO:0004672|GO:0006468
Acco11g0943 1077 PRINTS Tyrosine kinase catalytic domain signature 886 899 IPR001245 GO:0004672|GO:0006468
Acco11g0943 1077 PRINTS Tyrosine kinase catalytic domain signature 923 941 IPR001245 GO:0004672|GO:0006468
Acco11g0943 1077 ProSitePatterns Serine/Threonine protein kinases active-site signature. 929 941 IPR008271 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco11g0943 Acco-ChrAcco11 20625011 20630111 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco11g0943 23 1077 MAP Kinase Kinase Kinase AT5G57610 54.521 0.0 1047
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK TKL-Pl-6 Acco11g0943 PK_Tyr_Ser-Thr 4.1e-62 CL0016