Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco11g0937 ATGTCGGTTTCGTGCTCCGATCACTACTTGTGTGACTCCAACCTTCTTTGCTGCGAGGATACATCCGGAATCTTGTCCGGAGAGTCGCCGGAATGCTCCTCCAACTTAGATTCCTTGCCATCGCCGCCGGTATTTCTGGAGGATTCGATAGCCGGATTCATCGAAGAGGAGCGTAACTTCGTTCCTGGATTCGATTACTTCTCCAGATTTCAAACTGATTCGCTCTACGCCTCCGCCAGAGAAGAATCCGTTGCATGGATTCTCAAGGTGCAAGCATACTATGCTTTTCAGCCGCTGACGGCGTTTCTTGCCGTCAATTATTTGGACCGGTTTTTGGATTCTCGACAGTTGCCTCAGACGGATGGGTGGCCGATGCAACTTTTATCTGTTGCTTGTTTGTCATTAGCGGCAAAAATGGAGGAACTTTTCGTTCCGTCCCCTTTGGATCTTCAGGTAGAAGGTGCCAAATATATATTTGAGCCAAGAACAATTCGTCGGATGGAACTACTTGTTCTGACTGTTTTGGATTGGAGGCTAAGATCAATCACTCCATTCAGTTTCATAGATTTCTTTGCTTGCAAACTCGATCCAACGGGAACTCTTACTGGGACACTCATTTCTCGGGCTTCTGAAATAATCTTCTCTAATATCCAAGAGGCTAGCTTTCTTGCCTATCGGCCATCATGTATTGCTGTCGCGGCCATACTTTGTGCAGCTAATGAAATTCCTAATTGGTCTCTTGTTAGGCCTGAGCATGCTGAGTCATGGTGTGAGGGACTGATAAAAGAGAAAATCATAGGCTGCTACCAGATGATGCAAGAACTTGTGGTTGACAATAATAGGAGGAAGCTCCCTAAAGTCTTACCACAGCTGCGAGTTATGATCCAACCCAGAGTGAGTTCAAGTATTTTATCACTGTCTTCGTCTTCATCTTCTTCCTCGTCGTCGCCTAGTAAAAGGAGGAAATTAAATAACTGCCTGTGGGTGGATGATGACAAAGGAAACTCCCATGCTCTAGAGGGAGCGTCTGAAGAAGAAAAAGCAGAGATCATCAGATAG 1059 0.458 MSVSCSDHYLCDSNLLCCEDTSGILSGESPECSSNLDSLPSPPVFLEDSIAGFIEEERNFVPGFDYFSRFQTDSLYASAREESVAWILKVQAYYAFQPLTAFLAVNYLDRFLDSRQLPQTDGWPMQLLSVACLSLAAKMEELFVPSPLDLQVEGAKYIFEPRTIRRMELLVLTVLDWRLRSITPFSFIDFFACKLDPTGTLTGTLISRASEIIFSNIQEASFLAYRPSCIAVAAILCAANEIPNWSLVRPEHAESWCEGLIKEKIIGCYQMMQELVVDNNRRKLPKVLPQLRVMIQPRVSSSILSLSSSSSSSSSSPSKRRKLNNCLWVDDDKGNSHALEGASEEEKAEIIR 352
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco11g0937 352 PANTHER CYCLINS 55 280 IPR039361 -
Acco11g0937 352 Gene3D - 63 180 - -
Acco11g0937 352 Pfam Cyclin, C-terminal domain 182 289 IPR004367 -
Acco11g0937 352 Pfam Cyclin, N-terminal domain 51 179 IPR006671 -
Acco11g0937 352 SUPERFAMILY Cyclin-like 43 179 IPR036915 -
Acco11g0937 352 Gene3D - 54 243 - -
Acco11g0937 352 SMART Cyclin_C_2 182 318 IPR004367 -
Acco11g0937 352 FunFam D2/4-type cyclin 63 180 - -
Acco11g0937 352 SUPERFAMILY Cyclin-like 164 277 IPR036915 -
Acco11g0937 352 SMART cyclin_7 85 173 IPR013763 -
Acco11g0937 352 CDD CYCLIN_AtCycD-like_rpt1 79 177 - -
Acco11g0937 352 CDD CYCLIN_AtCycD-like_rpt2 182 272 - -
Acco11g0937 352 MobiDBLite consensus disorder prediction 329 352 - -
Acco11g0937 352 ProSitePatterns Cyclins signature. 80 111 IPR006671 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco11g0937 Acco-ChrAcco11 20500618 20503739 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco11g0937 1 337 Core Cell Cycle Gene Families AT1G70210 62.463 2.28e-136 390