Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco11g0898 ATGGCTTCTTCTTACTCCTTCTCCAATGTGCAGCCATGGCTTTGTTTAATCTTTCTCTTCGTTCTCCAAACTTCTCTGCTCTTACCAATCTGTAATTGTCAGCCTCAGAACATCGAAACCGTTTTTCCACCTGCAACTCCACCCCCAGCTCCTGCTCCTCCACCGACACCGAGCACTTCTCCATCGCCGCCGGTTGTCCCGCAGCCGGAAACAACTAGAAGTCCTTCATCATCATCGAACAGTAAGGTAGGGAGGGCTGTTGCTATTACTGCAGCGAGCACAGTGGTTGTTTCTGCGTTAGCCTTCTTCTTTATCCGATGGTGTTTAAAGAAAAGACGCATCGAAGAGAGACGTGTGAGCTCTGCTTCGGAACCTGTTGTTTCACCGCCGGCTAACGCGTTTGAGCGAATTGAAGGGAATGTGAAGGGATTGATTGTTGATGAGAATGGCTTGGATGTGATTTATTGGAGGAAGCTTGAAGGGAAGAATGGCTCCAAGAAGAAGGGATTAGAGAGAGAGGAGGTTCAAACTATTGCTAAAGAACAAGATCAAGAACAAGAAGTAAAGGTAATAATAGAAGAAGATGATGATGGTGGTGGTGGTGGGTTTGGAGGAAATCTGAGCCGGAAAAAATTTGAGCCTGTTCAAGAAATTCCTCTGCTTCGCGGGAAATCTTCGGCTTCCGAGAAGAGTTTAATATCAGAAAACGAACATGGGTCGAGTCGGAGTTGGATGAGAACGTTGTCACGAAAAACAGCCCCTCCTCCTCCCAGTAGTCCGGTGACGACGGCGGCTGTTACGCCACCATTACCTCTGCCACCCGCCGCTTATTATTATTCTTCTGTTTCAAAAGCGAAAGACGTGGCACCACCACATGCTGCTTCTTCTTCTGTTGTTTCACCACCATTACCACCACCACCAGCCGCTTATTATTATTCTTCTGTTTCAAAAGCGAAAAACGTGGAACCACCACCACATGCTGCTGCTTCTTCTTCTGTTGTTTCACCACCATTACCACCACCACCCTCTGCTTACTTTTCTGCTGTAAACAAAACAAAAAGCACTGAACCACCACCTCCACCACCGTTGGTTCCAGATAAAAAGGCTCCGGCGCCGCCTCCCCCACCTCCGCCTGCCAAAAAGGGTCCAGCTCCGCCACCCCCGCCTCCGCCAACTAAAAAGGGTCCAGCACCACCACCTGCTCCGCCCATGGCCGGAAACTTGAAGTCATCTTCAAAACCACCACCTAGCCCAGCTGAAATGTCAGGGGAAGACACTGATAAAGTGAAACTTAAGCCTTTACATTGGGATAAAGTCACCACTAATGTTGATCATTCCATGGTTTGGGACAAGTTGGATCGTGGCTCCTTCAGGGTTGATCAGGATTTTTTGGAAGCTCTTTTTGGATATGTGGCTACAAGCAAAAGAAGCCCAAGAGGGGAAAACGTTTCTTCTAGTCCAAGCAAGGAGGCTTCTGCACAATCAAGCACAATTTTCATTCTTGACCCCAAAAAATCACAGAACTTTGCTATTGTTTTGAAATCTCTAGCTGTGTCACGGAGAGCGATCATCGATGCCCTTGAAGATGGTCAAGGCCTTAGTTCAGATATAGTTGAGAAGATTGTTAGAGTAGCTCCAAATCAAGAAGAACAATCTAATATCCTTCAATATAATGGAGACCCTGCAAGGCTTGCAATTGCAGAATCCTTCCTTTATGACATACTCAATGCTGTTCCTTCGGCTTTCAAGCGTTTGAATGCTATGCATTTCAGGTTCAACTATGATTCTGAGGTATTAGAGATCAAGGACTCTTTGAACACCCTTGAATTGGCCTGCAAGGAGCTTCGGAACCGAGGGCTATTGGTGAAGCTTCTCGAGGCGGTCCTTAAGGCTGGGAACCATATGAATGCCGGAACATCAAGAGGCAATGCTGAAGCTTTTAACTTGACTTCTTTAAGGAAGCTCAAAGATGTCAAAACCACAGATGGGAAATCCACATTGCTTCACTTTGTGGTTGAAGGGGTTGTCCGGTCTGAGGGGAGACGGTGCGTTCTTAACCGCGACTGGAGCCTAAGTCGCAACGGAAGCAGGAAGATTAACAGCAAAGGAGAGTCTGAGAACTTTGTTTCAGATGAACAGAGAGAAATGGAATACTTAAGGTTAGGATTACCATTTGTTGGAGGAGTTAGTTCTGAGTTCTCCAATTTGAAGGAAGCAGCCATTATAGATTACAGTAGTTTACTTGCTTCAATCTCGTCACTCTCCACTAGGATAGCAGAAATCAAACAGCTTGTTTCAGAGTGTGGGAATGCTAAAGGAGGGAACTTTGAGAGAGAAATGGACTTATTTCTGAGAAATGCTGAGGAAGATTTGGGATTAGTGAGAGATGAGGAAAAAAGGGTAATGCAGATTGTGAAGAAAACAAATGAGTACTATCAAGGAGGAGCTTCAAAGAACAAGGCAGAGAACGCTTTGGAAATATTTGTTATTGTCAAGGATTTCCTGGTGATGGTTGATCAGGCCTGTATTGACATTTCTCGTAATATGAACCAGAAGAGGAAGAAGACAACAAAATCAAATTCTGGGTAA 2589 0.4554 MASSYSFSNVQPWLCLIFLFVLQTSLLLPICNCQPQNIETVFPPATPPPAPAPPPTPSTSPSPPVVPQPETTRSPSSSSNSKVGRAVAITAASTVVVSALAFFFIRWCLKKRRIEERRVSSASEPVVSPPANAFERIEGNVKGLIVDENGLDVIYWRKLEGKNGSKKKGLEREEVQTIAKEQDQEQEVKVIIEEDDDGGGGGFGGNLSRKKFEPVQEIPLLRGKSSASEKSLISENEHGSSRSWMRTLSRKTAPPPPSSPVTTAAVTPPLPLPPAAYYYSSVSKAKDVAPPHAASSSVVSPPLPPPPAAYYYSSVSKAKNVEPPPHAAASSSVVSPPLPPPPSAYFSAVNKTKSTEPPPPPPLVPDKKAPAPPPPPPPAKKGPAPPPPPPPTKKGPAPPPAPPMAGNLKSSSKPPPSPAEMSGEDTDKVKLKPLHWDKVTTNVDHSMVWDKLDRGSFRVDQDFLEALFGYVATSKRSPRGENVSSSPSKEASAQSSTIFILDPKKSQNFAIVLKSLAVSRRAIIDALEDGQGLSSDIVEKIVRVAPNQEEQSNILQYNGDPARLAIAESFLYDILNAVPSAFKRLNAMHFRFNYDSEVLEIKDSLNTLELACKELRNRGLLVKLLEAVLKAGNHMNAGTSRGNAEAFNLTSLRKLKDVKTTDGKSTLLHFVVEGVVRSEGRRCVLNRDWSLSRNGSRKINSKGESENFVSDEQREMEYLRLGLPFVGGVSSEFSNLKEAAIIDYSSLLASISSLSTRIAEIKQLVSECGNAKGGNFEREMDLFLRNAEEDLGLVRDEEKRVMQIVKKTNEYYQGGASKNKAENALEIFVIVKDFLVMVDQACIDISRNMNQKRKKTTKSNSG 862
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco11g0898 862 MobiDBLite consensus disorder prediction 44 82 - -
Acco11g0898 862 MobiDBLite consensus disorder prediction 214 270 - -
Acco11g0898 862 SMART it6_source 421 853 IPR015425 -
Acco11g0898 862 ProSiteProfiles Formin homology-2 (FH2) domain profile. 421 862 IPR015425 -
Acco11g0898 862 MobiDBLite consensus disorder prediction 284 433 - -
Acco11g0898 862 MobiDBLite consensus disorder prediction 253 270 - -
Acco11g0898 862 Coils Coil 598 618 - -
Acco11g0898 862 Gene3D Formin, FH2 domain 442 861 IPR042201 -
Acco11g0898 862 MobiDBLite consensus disorder prediction 44 70 - -
Acco11g0898 862 MobiDBLite consensus disorder prediction 227 248 - -
Acco11g0898 862 MobiDBLite consensus disorder prediction 354 405 - -
Acco11g0898 862 Pfam Formin Homology 2 Domain 425 838 IPR015425 -
Acco11g0898 862 SUPERFAMILY Formin homology 2 domain (FH2 domain) 497 857 - -
Acco11g0898 862 PANTHER FORMIN-RELATED 332 849 IPR027643 GO:0003779|GO:0030036|GO:0045010|GO:0051015
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco11g0898 Acco-ChrAcco11 19484863 19487545 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco11g0898 390 854 FH2 protein (formin) Gene Family AT1G70140 53.945 2.35e-164 495