Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco11g0894 ATGTCACCGGACGGCCACGTCGTGTCGGCGACTCCGGGAGACTTCAGGCTCCGCTGGGACGTCTTTCTGAGCTTCAGAGGTACGGATACTCGTGATTGCCTCACCAAACCTCTCTACTACGCGCTACAATCTCGCGGCGTTCGAGTTTTCCTGGACGATGTTGGGTTGGATCGCGGTGACCAGATAGCCCCGAGTCTGATCGAAGCCATCCATGACTCGGCCGCTTCGATTATCATCATCTCTCCTGATTACGCCTCTTCTCATTGGTGCCTGGAAGAGCTTGCCGAGATTTGCGACTGTGGGAAGCTGATTCTTCCGGTGTTCTACGGCGTAAGCCCTACTGATGTCCTCGAACAAGCAGGTCCATTCGAAAATTCTTTCAAGGTTCATAAAGCCAAGAGGAGCGAAGACGAGATAATTAGGTGGAGGAAAGCTATGAAGAAAGTAGGCGGAATTGCTGGTTGGGTTTTCAAGAATTCCAGCCCGGAAGAACTTCTAATTCGACTTTTAGTGCAAAGGGTTCTGAAAGAACTAAGTAATACTCTGGTGGGTTTGGCTGAATTTACCGTGGGACTCAATACTCGTATTGAAGAACTATTGAAATTGTTAGACATGAAATCCAATGGCGTAAGAGTATTGGGATTGCTTGGGATGGGCGGGGTTGGTAAGACAACCCTTGCAAAGGCTCTTTTTAACAGACTCATTGTGCATTTTGAGCATTGCAGCTTCATTTCAAGTGTTAGAGAAGCTTCATCCAAAGATGGAGGTTTAATTGCTCTAAGAAACAGAATTATCAGTGACATTTCCTCTCAAGTGGTCGATGGTGATGATATTTCTGCTTTCAGAAGAACAGTTAATGAACACCGTGTTCTGATAATCCTGGATGATGTGGATGATGCGAAGCAGCTCGATGCTCTAATAGGAAAAAGAGAATGGTTCTATGAGGGAAGCCGTATAGTAGTCACCACAAGGGATACACAGGCTTTGCCCGAGACTCATGTTAATGTCTCCTACGAGGTTAAGGTATTGGATGACTCTGATTCTTTAGAATTATTCTGTTATCATGCCATGAGAAGAAAGGAACCTGGAGACAAAAATCTTTTCAAGTTGTCCAAGGAAATAGTGTCTCTGACAGGAAGATTGCCTTTGGCTCTGGAAGTGTTTGGTTCAATGTTGTTTGGTAAGACAAGACAAGAGGAATGGGTTAATGCTGTGGAGAAACTGAAGGATATTCAACCTGGGAATCTTCAGGAAGTGTTGAAGATTAGTTATGAGGAGTTAGATGAACAAGAGAAATGCATCTTTCTTGACATTGCTTGTCTGTTCGTTCAGATGAGGATGAAGCGAGAAGATGTTATTGATGTACTAAGAGGTTGTAGATATGGGGGAGAGATAGCAATCGCAGTTCTCACAGAGAAATGTTTGATCAAAATCAGAGAGGACGAAACTATTTGGATGCATGATCAAATTAGTGACATGGGAAGGAAAATTGTTGTGGAAGAAAACCTTGTTGATCCGGCTATGCGTAGCAGACTGTGGGATCCATCTGAAATTCTAGTTGTTTTGAGGAATACGAAGGGATCTCGGAGTATTCAAGGGATGGTCCTAGACTTTAAGAAAAGATCTACTGAAGATAACGGAGGAGCAATATCTTGGAACAGCCGTAAATGTGGTTCCGTTTTTTTGAATGCCCTGGCATTCCTTAAACAGATGCACAATAAATATTTTAAACGAGTTGATAAAGACAAAGAGGTTGCAGTGCTTCAAACCAAGTCCTTTAAATCAATGGTGAATTTGGTGCTGCTTCAGATCAATTATTTGAGATTGGAAGGCAAGTTTAAATCTTTCCCTGCTGAATTGAAGTGGCTACAGTGGCATGGATCCCCTTTAAAACGCATGCCTTTTGATTTTTGGCCTCGAGAATTGACTGTCCTTGATCTCACACGCAGCCATATTGAGAAATTGTGGAATCGGAAAAGCTATAAGGTGCCCGAGAACCTCATGGTCATGAACCTCTCCTACTGCTATCACCTGGAGGCTCTTCCTGATCTATCTGGGTGCCGACGTTTAGAGAAGATTGTTCTTATGAACTGCATTAAACTAAGTAGGATTCACGAATCAGTTGGCAATCTGATCACACTTCGTCATTTGAATCTGACGCTTTGTACAGAACTTACTGAGTTACCCAATGATATATCTGGGCTGAAAAATCTAGAGAGCCTCTTTCTCTCTGACTGCTACAAGTTAAAATCGCTTCCAAGAAATATGGCCAGCTTGAAATCTCTAAGGAAGCTTCTCGCTAATGGCACGGCTTTAACAGAGCTGCCAAAGACTATTTTTCGCCTTGAGAAACTTGAAATTCTTGTGTTAAATGGTTGCCAATACTTAAGAAGACTACCTGACAACATTGGACTTTTGTGTTCTCTGCAAGAGCTTTCTCTTAACCAATCTGGATTAGAAGAACTACCCAATTCTGTTGGGCGTTTGAAAAACCTTGAGAAGCTTGGTTTGATGCATTGTTCTCTTACTGAGATACCTGATTCTATTGGAAACCTCAATTCACTTTCAGAGCTTCTGCTTTCTGGCACTGCTATTAGAGAACTTCCTTCTTCGATTGGATCATTGTCTTATCTAAATGAACTCTATGTAGGACAATGTAAGTTTCTGAAAAAATTGCCCGAGTCTATTAAGCTTTTGGCTTCCCTTGTTGAGCTTCAGCTAGATGGGGCAGCGATCACAGTTTTACCAGATGAGATTGGAGACATGAAGTTGCTGAAAAAGCTTGAAATGACGAATTGCCAGATGAGATCTCTGCCTGAATCAATTGGACACCTCTCAGCACTTACTAGCTTGAACATTTCCAATGGAAACATTGAAGAATTGCCAGAATCCATCAAAGAGATGAAGAACCTTGTTCATTTAGGGTTGGACAGATGCAGAATGCTAAGAAAGCTTCCAGATTCTCTAGGATCTTTGAAGTCCTTGTATCATCTTGGGATGGAGGAAACGGGTCTGACTGAATTACCTGAAAGCTTTGCTAGGCTTACCAGCTTAAGAACATTGAAAATGGCCAATAAGTCTGAAAATAACTTGCTTCAGGATTCTTTTGTAATCTCATCTTTTTTCTGCAATATGATATTTCTGAATGATCTGGACGCACGTGGTTGGAGAATATCTGGAAAAATTCCTGATGATTTTGAGACCTTGTCGTCTTTGGAGACTTTGAATCTTAGCCAAAACACATTTCACAGCCTTCCTTCCAGTTTGGCGGGCCTTTGTGTTCTCAAGAAATTCTCTCTTCAACACTGCACCGAGCTGGTTTCTCTCCCTACTCTTCCCTCAAGCTTGATAGAGCTGAATGCTGCAGACTGTTTTATCTTACAAAACATTCCCGACCTTTCAAATTTAAAATGTTTGAAGGATCTAAACCTGACAAATTGTGTAAAACTGGTGGATATTCCAGGTCTTGAACGTTTAGAGTCTTTGAGGAATTTGCACTTGGGTGGATGCATTGCTTGCTGCTCTACTGTCTGCAAGAGATTTTCTAAGGTTACAATGAGGAATTTATGGAACTTGAGCATGCCAGGAACCAGATTACCCAAATGGTTTTCAGGACAAGCTGTAAGCTTTTCGAAGCCCAAGAACCGAGAAATAACAGGCGTAATTGTGGGTATCATTCTTTCTATCAACCATGATACACCCAGTGAACTGCAAGTTCAACCTCCCGGTGTGGTAGATATCGAAGCAAATGTCTTCAAACAGGGCAAAAATATTTACAGTTCAGTGTTGGACTTGCGTGGGTTGCCAAGAACGAATGAGGAACAAATATATCTTTGCAGATTCCCAGGTTACCATCAACTCATGTCTTGCTTGCAACACGGGGACACATTTTGTGTGACCAAGAAAAACCCACCAGTGGATAAGAGATTACAGTTGAAAAAATGTGGGGTTCATTTGATGTTTGAAGGGGATGATGAGGATTATGATGGAGATGAAGAATCTGGGGAGAGAAGGCTACAATCTGTGTCAGAAAAGCTGGGAAAGTTTTTCAACACTTACGAAGAAGATGGCCTAGATGATGATATGGAGTGTGAAGACGAAGAGGGATTATTATCGTGCTTCAAGTGTCTCTAG 4134 0.4214 MSPDGHVVSATPGDFRLRWDVFLSFRGTDTRDCLTKPLYYALQSRGVRVFLDDVGLDRGDQIAPSLIEAIHDSAASIIIISPDYASSHWCLEELAEICDCGKLILPVFYGVSPTDVLEQAGPFENSFKVHKAKRSEDEIIRWRKAMKKVGGIAGWVFKNSSPEELLIRLLVQRVLKELSNTLVGLAEFTVGLNTRIEELLKLLDMKSNGVRVLGLLGMGGVGKTTLAKALFNRLIVHFEHCSFISSVREASSKDGGLIALRNRIISDISSQVVDGDDISAFRRTVNEHRVLIILDDVDDAKQLDALIGKREWFYEGSRIVVTTRDTQALPETHVNVSYEVKVLDDSDSLELFCYHAMRRKEPGDKNLFKLSKEIVSLTGRLPLALEVFGSMLFGKTRQEEWVNAVEKLKDIQPGNLQEVLKISYEELDEQEKCIFLDIACLFVQMRMKREDVIDVLRGCRYGGEIAIAVLTEKCLIKIREDETIWMHDQISDMGRKIVVEENLVDPAMRSRLWDPSEILVVLRNTKGSRSIQGMVLDFKKRSTEDNGGAISWNSRKCGSVFLNALAFLKQMHNKYFKRVDKDKEVAVLQTKSFKSMVNLVLLQINYLRLEGKFKSFPAELKWLQWHGSPLKRMPFDFWPRELTVLDLTRSHIEKLWNRKSYKVPENLMVMNLSYCYHLEALPDLSGCRRLEKIVLMNCIKLSRIHESVGNLITLRHLNLTLCTELTELPNDISGLKNLESLFLSDCYKLKSLPRNMASLKSLRKLLANGTALTELPKTIFRLEKLEILVLNGCQYLRRLPDNIGLLCSLQELSLNQSGLEELPNSVGRLKNLEKLGLMHCSLTEIPDSIGNLNSLSELLLSGTAIRELPSSIGSLSYLNELYVGQCKFLKKLPESIKLLASLVELQLDGAAITVLPDEIGDMKLLKKLEMTNCQMRSLPESIGHLSALTSLNISNGNIEELPESIKEMKNLVHLGLDRCRMLRKLPDSLGSLKSLYHLGMEETGLTELPESFARLTSLRTLKMANKSENNLLQDSFVISSFFCNMIFLNDLDARGWRISGKIPDDFETLSSLETLNLSQNTFHSLPSSLAGLCVLKKFSLQHCTELVSLPTLPSSLIELNAADCFILQNIPDLSNLKCLKDLNLTNCVKLVDIPGLERLESLRNLHLGGCIACCSTVCKRFSKVTMRNLWNLSMPGTRLPKWFSGQAVSFSKPKNREITGVIVGIILSINHDTPSELQVQPPGVVDIEANVFKQGKNIYSSVLDLRGLPRTNEEQIYLCRFPGYHQLMSCLQHGDTFCVTKKNPPVDKRLQLKKCGVHLMFEGDDEDYDGDEESGERRLQSVSEKLGKFFNTYEEDGLDDDMECEDEEGLLSCFKCL 1377
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco11g0894 1377 Pfam TIR domain 19 180 IPR000157 GO:0007165
Acco11g0894 1377 Pfam NB-ARC domain 194 427 IPR002182 GO:0043531
Acco11g0894 1377 Gene3D - 179 338 IPR027417 -
Acco11g0894 1377 PRINTS Disease resistance protein signature 212 227 - -
Acco11g0894 1377 PRINTS Disease resistance protein signature 378 392 - -
Acco11g0894 1377 PRINTS Disease resistance protein signature 284 298 - -
Acco11g0894 1377 PRINTS Disease resistance protein signature 780 796 - -
Acco11g0894 1377 SMART LRR_typ_2 992 1014 IPR003591 -
Acco11g0894 1377 SMART LRR_typ_2 759 782 IPR003591 -
Acco11g0894 1377 SMART LRR_typ_2 806 829 IPR003591 -
Acco11g0894 1377 SMART LRR_typ_2 1069 1092 IPR003591 -
Acco11g0894 1377 SMART LRR_typ_2 899 922 IPR003591 -
Acco11g0894 1377 SMART LRR_typ_2 945 968 IPR003591 -
Acco11g0894 1377 SMART LRR_typ_2 852 875 IPR003591 -
Acco11g0894 1377 SMART LRR_typ_2 735 758 IPR003591 -
Acco11g0894 1377 Gene3D - 342 428 IPR042197 -
Acco11g0894 1377 SUPERFAMILY L domain-like 889 1193 - -
Acco11g0894 1377 SUPERFAMILY Toll/Interleukin receptor TIR domain 15 155 IPR035897 -
Acco11g0894 1377 SUPERFAMILY L domain-like 486 916 - -
Acco11g0894 1377 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 20 802 IPR044974 GO:0006952
Acco11g0894 1377 Gene3D Ribonuclease Inhibitor 566 794 IPR032675 -
Acco11g0894 1377 SMART till_3 18 152 IPR000157 GO:0007165
Acco11g0894 1377 Gene3D Ribonuclease Inhibitor 1115 1190 IPR032675 -
Acco11g0894 1377 Gene3D Ribonuclease Inhibitor 901 1114 IPR032675 -
Acco11g0894 1377 Gene3D Ribonuclease Inhibitor 795 891 IPR032675 -
Acco11g0894 1377 ProSiteProfiles Leucine-rich repeat profile. 1071 1093 IPR001611 GO:0005515
Acco11g0894 1377 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 186 438 IPR027417 -
Acco11g0894 1377 SMART LRR_bac_2 1113 1133 - -
Acco11g0894 1377 SMART LRR_bac_2 759 778 - -
Acco11g0894 1377 SMART LRR_bac_2 945 964 - -
Acco11g0894 1377 SMART LRR_bac_2 664 684 - -
Acco11g0894 1377 SMART LRR_bac_2 1069 1088 - -
Acco11g0894 1377 Gene3D - 17 178 IPR035897 -
Acco11g0894 1377 ProSiteProfiles TIR domain profile. 17 182 IPR000157 GO:0007165
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco11g0894 Acco-ChrAcco11 19424680 19431139 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco11g0894 830 951 WRKY Transcription Factor Family AT4G12020 34.722 7.00e-08 55.5