Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco11g0893 ATGTCACCGGACGGCGATGTCGATTCGGAAGGTCCGGTAGCCTCCAGGCGCCGGTCGGACGTGATCCTGAGCTTCCGAAGTACGGATAATTGTGGTTGCTTCACCGAACCCCTCTCCAACGCCCTCCAATCAGGCGGCCTTCGGATTTTTCTCGACGACGTTGGATTAGATCCTGGTGACCAGATAGCCCAACAGAGTCAGCTCGAAGCTATCGATGACTCGGCCGCTTCGATCATCATCGTCTCTCCTAATTACGCTTCTTCTCATTGGTGTCTGGAGAAGCTCGCTAAGATTTGCGACTGCAAGAGACTGATTCTGCCGGTGTTCTTCAACGTCGACCCGCGTGATGTCCGGAAACAAGAGGGTCCATTCAAAGATTCTTTCGAGGATCACAAGGCCAAGAGGAGAGAAGAAGACGTACTAAGGTGGAGGGAAGCTATGAAGAAAATAGGTGGAATCGCTGGTTTCGTTTTTCCGAATCGCAGTGAAAGGAACGATGACCAAATTCGAGTTTTAGTGAAAAGAATTCTAAGAGAACTGAGCAATACTCCGGTGGGTGTGGCTGAATTTACCGTTGGACTCGATGCTCGTATTGAAAAACTATTGGAATTGTTAGACGTAAACTCCAATGGCGTAAGAGTTTTGGGATTGTTTGGGATGGGTGGGGTGGGGAAGACAACCCTTGCAAAGGCTCTTTTTAACAGACTCGTTGGGCATTTTGAGCATCGCAGCTTCGTTTCAAGTGTAAGAGAAGAATCATCCAAAGATGGAGGTTTAATTGCTCTGAGAAACAGAATTATCAATGACACTTCCCGTCGAGTAGTTGATGGTGATGACATTCCTGCTTTCAGAAGAACAGTTGATGAATATCGAGTTCTGATAATCCTGGATGATGTGGACGATGTGAAGCAACTTGATACTCTAATAGGAAAAAGGGAATGGTTCCATGAGGGAAGCCGTATTGTAGTCACCTCAAGGGATACACGAGCTTTGCCTGAGACTTATGTTAATGTCTCGTACGAGGTTAAGGTATTGGTTGACTCTGATTCATTAGAACTATTCTGTTACCATGCAATGAGAAGAAATGAACCTGCAGGCGAAGATCTTTTGAAGTTGTCGAAGGAAATAGTGTCTCTAACGGGAGGGTTGCCTTTGGCTCTAGAAGTGTTTGGTTCAATGCTGTTTGGTAAGAGAAAGAAAGAGGAATGGGTTGATGTTGTGAGGAAGCTGAAGCTGACTGGAACAGGAAACGTACGTAAAGTGTTGAGGATCAGCTATGATGAGGGGTTAAATGAACAAGAAAAATGCATCTTCCTTGACATTGCTTGTCTGTTCGTTCAGATGAGGATGAAGCAAGAAGAAGTTATTGATGTACTGAGAGGTTGTGAATTTGATGGAGAGGAAGCAATCAAAGTTCTCTCAAAAAAATGTCTGATCAAAATCACAGAGGATAAAACCATTTGGATGCATGATCAAATTAGAGATATGGGAAGGCAAATTGTTGTGGATGAAAACCTTGTTGATCCCAGTATGCGTAGTAGATTGTGGGACCGATCTCAAATTCTTGGTGTTTTGAGGAATTTGAAGGGAACAAGCAGAATTCATGGGATTGTGCTAGACTTAGAGAAGGGAGATGCTAAAGGTCATAAAGTTGATGAAGCAATTTCTGGGAAAAACCTTCGATGTGGTTCAAGTTTAGCAAATGCGGTGGCATTCCTCAAACAGATGCACAAGAAATATTTTCAACGAGTTGAAAGAGACATAGAGGTTGGAGTGATTAAGACCAAAGCCTTTAAATCAATGGTGAACTTGATGCTGCTTCAGATCAATGATTTGAGATTGGAAGGAAAGTTTAAATATTTCCCTTCAAAATTGAAGTGGCTAAAATGGCAACGGTGCCCATTAACGTGCTTGCCTTCTGATTTTTGGCCCCGTGAATTGGCTATCCTTGATCTCACACACAGCAATATTGAGAGTTTGTGGAATCGGAAAGGCGGCAAGGCGCCAGAGAATATAATAGTCATGAACCTCTCCGAGTGCTATCGCCTGAAGGCCCTTCCTGATTTGTTTGGGTGCCGACATTTAGAGAAGATTGTTTTAGTGGGCTGCGTTAAACTAAGTAGGATTCACGAATCAGTTGGCAATCTGACCACACTTCGTCATTTCAATCTGACTCGTTGTGAAGAACTTACCGAGTTACCCAATGATATATCTGGGTTGGAAAATCTAGAGGGCCTCTGTCTCTCTGACTGCCACAAGTTGAAATCGTTACCAAGAAACATGGCCAACTTGAAATCACTAAGAAAACTACTTGCTGATGGCACGGCCATAGCAGAGCTGCCTGAGACTATTTTTTGCCTTGAAAAACTTGAAATTCTTGTTTTAAATGGTTGCCGCAACTTAAAAAGACTACCTGACAACATAACCCATTCGTGTTCTCTGCAAGAGCTGTCTCTCGACGGATCTGGATTAGAAGAACTGCCCAACTCTGTGGGGCATTTAAAAAACATTGAGAAGCTTGGTTTGATGCATTGCAAGTCTCTCAATGAGATTCCTGATTCTATTGGAGATCTTGTTTCACTTCCAAAGCTTCAGCTTAATGGCACTGCTATTAAAGAGCTTCCTTCTTCAATTGGATCATTGTCTTGTCTAAATGAACTCTCTGTAGGAAACTGCAAGTCTCTGAGAAACTTGCCGGAGTCTATTAAGCTTTTGGCTTCAGTTGTTGAGCTTCAGCTAGATGGGACAGCGATCACAGAATTGCCAGATGAGATTGGGGATATGAGATTACTCAAAAAGCTTGAAATGCGGAATTGCCAGATGAGATATCTGCCTGAATCGATTGGCAACCTCACAGCTCTTTCAACCTGGAATATTTACAGAGGTAACATTGTAGAACTGCCAGAGTCCATTGGAAGGCTCGAGAATTTAATCTATTTAAACTTGGAACAATGCACAATGCTTAGAAGGCTTCCGCATTCTACTGGACATTTGAAGTCATTATATCATCTTAGAATGGAGGAAACGGGTCTGACAGAATTACCTCAAAGCTTTGGCATGCTTACCAACTTAAGGACGCTGAAAATGGCCAAGAAGTCAGCAAATAACATGGTGCAGGATTCTTTTGTAATCTCATCTTTTTTCTGCAACATGAGATTTCTGAATGATCTGGATGCTCGTGGTTGGAGAATATCTGGGAAAATTCCTGATGATTTTGAAAAGTTGTCCTCTTTACAGACTTTGAAACTAAGCCAAAACAAATTTCACAGCTTTCCTTCCAGTATGGTAGGCCTTTCCGTTCTCAAGGTACTTCAGGTTCAAAACTGCCTTGAACTGGTTTCTCTCCCTGCTCTTCCCTCAAGCTTGACGGATCTGAATGCTGCAGACTGTTGTAACTTACAAAGCATTCATGACCTTTCAAGTTTAACAGACTTGCGGGAACTAAACTTCTCCAATTGTGTAAAATTGGTGGATATTCCTGGTCTTGAACGGTTAGGTTCTTTGAGGAAATTGTTCTTTGGTGGATGCATTACATGCTCCCCCACAATCCGTAAGAGACTCTCTAAGGTTACACTGAGGAATTTAACGAACTTAAGCATGCCGGCGACAAGATTACCCAAATGGTTTTCAGGACAAGCTGTAACCTTTTCAAAGCCCAGGAGCCGTGAACTAACAGTAAATATCCTCAGACGTGGAGAAAATCCATATAGTTCAGTATTGGACTTGCGTGGGTTGCCAAGAACGAATGAAGAACACATACACATTTGCAGGTATCGGTATAACTCAAAACTCATCTCTATGTTGCAAGACGGTGACACAATTTGTGTGACACAGAGAGACCCACCTGTGGATAAGGGGTTGGAGCTGAAAAAATGTGGGGTTCATTTGATCTTTGATGGGGATGATGATTATGGTGGAGATGAAGAATCTGTCGACCTAAGTTTACAATCTTTGTCAGAAAAATTGGCCAAGTTTTTCAACACTTACGAAGAAGATAGCTCCAGAGATGGAATTGAGAGTGAAGATGATGATGATGAGTGCCCAAAGGAAATAGAGAATGAAGCCCAATAA 4071 0.4269 MSPDGDVDSEGPVASRRRSDVILSFRSTDNCGCFTEPLSNALQSGGLRIFLDDVGLDPGDQIAQQSQLEAIDDSAASIIIVSPNYASSHWCLEKLAKICDCKRLILPVFFNVDPRDVRKQEGPFKDSFEDHKAKRREEDVLRWREAMKKIGGIAGFVFPNRSERNDDQIRVLVKRILRELSNTPVGVAEFTVGLDARIEKLLELLDVNSNGVRVLGLFGMGGVGKTTLAKALFNRLVGHFEHRSFVSSVREESSKDGGLIALRNRIINDTSRRVVDGDDIPAFRRTVDEYRVLIILDDVDDVKQLDTLIGKREWFHEGSRIVVTSRDTRALPETYVNVSYEVKVLVDSDSLELFCYHAMRRNEPAGEDLLKLSKEIVSLTGGLPLALEVFGSMLFGKRKKEEWVDVVRKLKLTGTGNVRKVLRISYDEGLNEQEKCIFLDIACLFVQMRMKQEEVIDVLRGCEFDGEEAIKVLSKKCLIKITEDKTIWMHDQIRDMGRQIVVDENLVDPSMRSRLWDRSQILGVLRNLKGTSRIHGIVLDLEKGDAKGHKVDEAISGKNLRCGSSLANAVAFLKQMHKKYFQRVERDIEVGVIKTKAFKSMVNLMLLQINDLRLEGKFKYFPSKLKWLKWQRCPLTCLPSDFWPRELAILDLTHSNIESLWNRKGGKAPENIIVMNLSECYRLKALPDLFGCRHLEKIVLVGCVKLSRIHESVGNLTTLRHFNLTRCEELTELPNDISGLENLEGLCLSDCHKLKSLPRNMANLKSLRKLLADGTAIAELPETIFCLEKLEILVLNGCRNLKRLPDNITHSCSLQELSLDGSGLEELPNSVGHLKNIEKLGLMHCKSLNEIPDSIGDLVSLPKLQLNGTAIKELPSSIGSLSCLNELSVGNCKSLRNLPESIKLLASVVELQLDGTAITELPDEIGDMRLLKKLEMRNCQMRYLPESIGNLTALSTWNIYRGNIVELPESIGRLENLIYLNLEQCTMLRRLPHSTGHLKSLYHLRMEETGLTELPQSFGMLTNLRTLKMAKKSANNMVQDSFVISSFFCNMRFLNDLDARGWRISGKIPDDFEKLSSLQTLKLSQNKFHSFPSSMVGLSVLKVLQVQNCLELVSLPALPSSLTDLNAADCCNLQSIHDLSSLTDLRELNFSNCVKLVDIPGLERLGSLRKLFFGGCITCSPTIRKRLSKVTLRNLTNLSMPATRLPKWFSGQAVTFSKPRSRELTVNILRRGENPYSSVLDLRGLPRTNEEHIHICRYRYNSKLISMLQDGDTICVTQRDPPVDKGLELKKCGVHLIFDGDDDYGGDEESVDLSLQSLSEKLAKFFNTYEEDSSRDGIESEDDDDECPKEIENEAQ 1356
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco11g0893 1356 Gene3D Ribonuclease Inhibitor 906 1122 IPR032675 -
Acco11g0893 1356 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 20 807 IPR044974 GO:0006952
Acco11g0893 1356 Gene3D Ribonuclease Inhibitor 585 903 IPR032675 -
Acco11g0893 1356 SMART LRR_typ_2 905 927 IPR003591 -
Acco11g0893 1356 SMART LRR_typ_2 928 951 IPR003591 -
Acco11g0893 1356 SMART LRR_typ_2 764 787 IPR003591 -
Acco11g0893 1356 SMART LRR_typ_2 812 834 IPR003591 -
Acco11g0893 1356 SMART LRR_typ_2 998 1020 IPR003591 -
Acco11g0893 1356 SMART LRR_typ_2 1075 1098 IPR003591 -
Acco11g0893 1356 SMART LRR_typ_2 858 881 IPR003591 -
Acco11g0893 1356 Gene3D - 178 338 IPR027417 -
Acco11g0893 1356 MobiDBLite consensus disorder prediction 1332 1356 - -
Acco11g0893 1356 MobiDBLite consensus disorder prediction 1335 1356 - -
Acco11g0893 1356 ProSiteProfiles TIR domain profile. 17 184 IPR000157 GO:0007165
Acco11g0893 1356 Pfam NB-ARC domain 196 427 IPR002182 GO:0043531
Acco11g0893 1356 Pfam TIR domain 21 180 IPR000157 GO:0007165
Acco11g0893 1356 SUPERFAMILY L domain-like 895 1198 - -
Acco11g0893 1356 Gene3D Ribonuclease Inhibitor 1123 1281 IPR032675 -
Acco11g0893 1356 Gene3D - 345 429 IPR042197 -
Acco11g0893 1356 Gene3D - 16 177 IPR035897 -
Acco11g0893 1356 SUPERFAMILY L domain-like 488 922 - -
Acco11g0893 1356 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 185 441 IPR027417 -
Acco11g0893 1356 SUPERFAMILY Toll/Interleukin receptor TIR domain 19 153 IPR035897 -
Acco11g0893 1356 CDD Ras_like_GTPase 216 301 - -
Acco11g0893 1356 SMART till_3 18 153 IPR000157 GO:0007165
Acco11g0893 1356 PRINTS Disease resistance protein signature 214 229 - -
Acco11g0893 1356 PRINTS Disease resistance protein signature 380 394 - -
Acco11g0893 1356 PRINTS Disease resistance protein signature 286 300 - -
Acco11g0893 1356 PRINTS Disease resistance protein signature 785 801 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco11g0893 Acco-ChrAcco11 19416819 19423162 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco11g0893 66 911 WRKY Transcription Factor Family AT4G12020 29.506 4.22e-74 270