Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco11g0892 ATGTCACCGGACGGCGATGTCGATTCGTCAACTCCGGGAGCCTCCAGGCGCCGGTGGGACGTGATCCTGAGCTTCCGAAGTACGGATAATTGTGGTTGCTTCACCGAACCCCTCTCCAACGCCCTCCAATCAGGCGGCCTTCGGATTTTTCTCGACGACGTTGGATTAGATCCTGGTGACCAGATAGCCCAACAGAGTCAGCTCGAAGCTATCGATGACTCGGCCGCTTCGATCATCATCGTCTCTCCTAATTACGCTTCTTCTCATTGGTGTCTGGAGAAGCTCGCTAAGATTTGCGACTGCAAGAGACTGATTCTGCCGGTGTTCTTCAACGTCGACCCGCGTGATGTCCGGAAACAAGAGGGTCCATTCAAAGATTCTTTCGAGGATCACAAGGCCAAGAGGAGAGAAGAAGACGTACTAAGTGAAAGGAACGATGACCAAATTCGAGTTTTAGTGAAAAGAATTCTAAGAGAACTGAGCAATACTCCGGTGGGTGTGGCTGAATTTACCGTTGGACTCGATGCTCGTATTGAAAAACTATTGGAATTGTTAGACGTAAACTCCAATGGCGTAAGAGTTTTGGGATTGTTTGGGATGGGTGGGGTGGGGAAGACAACCCTTGCAAAGGCTCTTTTTAACAGACTCGTTGGGCATTTTGAGCATCGCAGCTTCGTTTCAAGTGTAAGAGAAGAATCATCCAAAGATGGAGGTTTAATTGCTCTGAGAAACAGAATTATCAATGACACTTCCCGTCGAGTAGTTGATGGTGATGACATTCCTGCTTTCAGAAGAACAGTTGATGAATATCGAGTTCTGATAATCCTGGATGATGTGGACGATGTGAAGCAACTTGATACTCTAATAGGAAAAAGGGAATGGTTCCATGAGGGAAGCCGTATTGTAGTCACCTCAAGGGATACACGAGCTTTGCCTGAGACTTATGTTAATGTCTCGTACGAGGTTAAGGTATTGGTTGACTCTGATTCATTAGAACTATTCTGTTACCATGCAATGAGAAGAAATGAACCTGCAGGCGAAGATCTTTTGAAGTTGTCGAAGGAAATAGTGTCTCTAACGGGAGGGTTGCCTTTGGCTCTAGAAGTGTTTGGTTCAATGCTGTTTGGTAAGAGAAAGAAAGAGGAATGGGTTGATGTTGTGAGGAAGCTGAAGCTGACTGGAACAGGAAACGTACGTAAAGTGTTGAGGATCAGCTATGATGAGGGGTTAAATGAACAAGAAAAATGCATCTTCCTTGACATTGCTTGTCTGTTCGTTCAGATGAGGATGAAGCAAGAAGAAGTTATTGATGTACTGAGAGGTTGTGAATTTGATGGAGAGGAAGCAATCAAAGTTCTCTCAAAAAAATGTCTGATCAAAATCACAGAGGATAAAACCATTTGGATGCATGATCAAATTAGAGATATGGGAAGGCAAATTGTTGTGGATGAAAACCTTGTTGATCCCAGTATGCGTAGTAGATTGTGGGATCGATCTCAAATTCTTGGTGTTTTTAGGAATTTGAAGAATACCAATTTCTTATATATGTTGTTAAATATTTTGTTACTTTCGAAACCGTGGGGAACAAGCAGAATTCATGGGATTGTGCTAGACTTAGAGAAAGGAGGTGCTAAAGGTCATAAAGTTGATGAAGCAATTTCTGGGAAAAACCTTCGATGTGGTTCAAGTTTAGCAAATGTGGTGGCATTCCTCAAACAGATGCACAAGAAATATTTTCAACGAGTTGAGAGAGATATAGAGGTTGGAGTGATTCAGACCAAAGCCTTTAAATCATTGGTGAACTTGATGCTGCTTCAGATCAATGATTTGAGATTGGAAGGAAAGTTTAAATATTTCCCTTCAAAATTGAAGTGGCTAAAATGGCAACGGTGCCCATTAACGTGCTTGCCTTGTGATTTTTGGCCCCGTGAATTGGCTATCCTTGATCTCACACACAGCAATATTGAGAGTTTGTGGAATCGGAAAGGCTGCAAGGATGTGCCATAG 2007 0.431 MSPDGDVDSSTPGASRRRWDVILSFRSTDNCGCFTEPLSNALQSGGLRIFLDDVGLDPGDQIAQQSQLEAIDDSAASIIIVSPNYASSHWCLEKLAKICDCKRLILPVFFNVDPRDVRKQEGPFKDSFEDHKAKRREEDVLSERNDDQIRVLVKRILRELSNTPVGVAEFTVGLDARIEKLLELLDVNSNGVRVLGLFGMGGVGKTTLAKALFNRLVGHFEHRSFVSSVREESSKDGGLIALRNRIINDTSRRVVDGDDIPAFRRTVDEYRVLIILDDVDDVKQLDTLIGKREWFHEGSRIVVTSRDTRALPETYVNVSYEVKVLVDSDSLELFCYHAMRRNEPAGEDLLKLSKEIVSLTGGLPLALEVFGSMLFGKRKKEEWVDVVRKLKLTGTGNVRKVLRISYDEGLNEQEKCIFLDIACLFVQMRMKQEEVIDVLRGCEFDGEEAIKVLSKKCLIKITEDKTIWMHDQIRDMGRQIVVDENLVDPSMRSRLWDRSQILGVFRNLKNTNFLYMLLNILLLSKPWGTSRIHGIVLDLEKGGAKGHKVDEAISGKNLRCGSSLANVVAFLKQMHKKYFQRVERDIEVGVIQTKAFKSLVNLMLLQINDLRLEGKFKYFPSKLKWLKWQRCPLTCLPCDFWPRELAILDLTHSNIESLWNRKGCKDVP 668
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco11g0892 668 SUPERFAMILY Toll/Interleukin receptor TIR domain 16 137 IPR035897 -
Acco11g0892 668 Gene3D - 162 319 IPR027417 -
Acco11g0892 668 SUPERFAMILY L domain-like 592 660 - -
Acco11g0892 668 Gene3D - 13 161 IPR035897 -
Acco11g0892 668 Pfam TIR domain 20 143 IPR000157 GO:0007165
Acco11g0892 668 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 20 658 IPR044974 GO:0006952
Acco11g0892 668 SUPERFAMILY "Winged helix" DNA-binding domain 397 503 IPR036390 -
Acco11g0892 668 ProSiteProfiles TIR domain profile. 17 164 IPR000157 GO:0007165
Acco11g0892 668 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 164 421 IPR027417 -
Acco11g0892 668 SMART till_3 18 163 IPR000157 GO:0007165
Acco11g0892 668 Pfam NB-ARC domain 176 407 IPR002182 GO:0043531
Acco11g0892 668 PRINTS Disease resistance protein signature 360 374 - -
Acco11g0892 668 PRINTS Disease resistance protein signature 194 209 - -
Acco11g0892 668 PRINTS Disease resistance protein signature 266 280 - -
Acco11g0892 668 CDD Ras_like_GTPase 196 281 - -
Acco11g0892 668 Gene3D - 325 409 IPR042197 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco11g0892 Acco-ChrAcco11 19386290 19389497 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco11g0892 172 667 WRKY Transcription Factor Family AT5G45050 27.655 8.30e-48 180