Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco11g0890 ATGTCAACGGACGGCCACGTCATTTCTTCGACTCCGGGAGCCTTCAGGCTCCGTTGGGACGTCTTCCTGAGCTTCAGAGGTGCGGATACTCGTAATTGCTTCACGATACCCCTTTACAAGGCTCTCCAATCTCGCGGCGTTCGGGTTTTCCTCGACGACGTTGGACTTAATCGGGGTGACCACATAGCCCCGAGTCTGATCGAAGCCATCCGTGACTCGGCCGCTTCGATTATCGTCATCTCTCCTGATTACGCCTCTTCTCATTGGTGTTTGGAGGAGCTTGCCGAGATTTGCGACTGCCGGAGACTGATTCTGCCGGTGTTCTTCAACGTCAACCCGCGTGATGTCCGGAAACAAGAGGGTCCATTCAAAGATTCTTTCGAGGATCACAAGGCTAAGAGGAAACAAGAAGATGTACTCAGGTGGAGGGAAGCAATGAAGGAAGTAGGTGGAATCGCTGGTTCCCCTTTCTCGCATCCCAGTGAAAAGGAAGAAGGCTTTGCAGAGGAGAGAGATGACCTGATTCGACTTTTAGTAACAAGGATTCTGAGAGAACTGAGTAATGCTCCGGTGGGTGTGGCTGAATTTACCGTTGGACTCGATGCTCGAATTGAACGATTGTTGGAACTGTTGGACATGAGATCCAACGGCATAGGAGTATTGGGATTGTATGGGATGGGTGGGATTGGCAAGACAACCCTTGCGAAGGCACTTTTTAACAGACTCGTTGTGGATTTTGAGCGACGCAGCTTCATCTCAAGTGTTAGAGAAGTTTCATCCAAAGATGGAGGCTTAGTTTCTTTAAGAGACAGAATTATTGGTGACATATCCTCTCAAAAAGTGGTTGGTAATGATATTTCTACTTTCAGAAAAACAGTTTGTGAAAACCGTGCTCTGATAATTCTGGATGATGTGGATGATGTGAAGCAGCTAGATATTCTAATTGGCAAAAGAGAATGGTTCCATGAGGGAAGCCGTGTTGTAGTAACCTCGAGGAGTAGACAAGCTTTGGCTGAGACTTATGTTAATGTCTTCTACGAGGTTCTAATATTGGATGACTCTGAGTCACTAGAATTATTCTGTTACCATGCAATGAGAAGAAAGGAACCTGCAGACAACACTTTTTTCAAATTGTCAAAGGAAATAGTGTCTCTAACAGGAAGATTGCCTTTAGCTCTGGAAGTGTTTGGTTCAATGTTGTTTGGTAAGAGAAGGGAAAAGGAATGGGTTGATGCTGTGGAGAAGCTGAAGCTGATTCGACCTGGGGATCTCCAGGAAGTGTTGAAGATAAGTTATGAAGGGTTAGATGAACAAGAGAAATGCATCTTCCTTGACATTGCTTGCTTGTTTGTTCAAATGAGCATGAAGCGAGAAGATGTCATTGATGTATTGAGAGGTTGTGGGTTTAAAGGAGAGATAGCAATCACAGTTCTCACAGAGAAATGTTTGATCAAAATCAGAGAGGATGAAACCATTTGGATGCATGATCAGCTTAGAGACATGGGAAGGCAAATTGTTGTGGATGAAAATCTTGTTGATCCTGGTATGCGTAGTAGATTGTGGGATCGATCTGAAATTCTTACTGTTTTGAGGAATTTGAAGGGAACTCGGAGTGTACGAGGGATGGTCCTTGACTTTGAGAAAAGATCTCCCAAAGATCATAGAGGTGAGGAAGTAATTTCTTGGAACAACCTTCAACAGGGTTCAAGTGTCACAAATGCCCTGGCATTTCTTAAACAGATGCCCAAGAAATATTTTCAACGAGCTGAGAAAAACAGAGAGGCTCTAGTAATTCATACCAAGTCATTTGAATCAATGGTGAGCTTGGGGCTGCTTCAGATCAATAATTTGACATTGGAAGGGAAGTTCAAATCTTTCCCTGCAGAATTGAAGTGGCTACAATGGCATGGATGCCCTTTAAAATGCATGCCTTCTGATTTTTGCCCTCAAGAATTGGCTGTCCTTGACCTCACACGCAGCAATCTTGAGAACTTGTGGGATTTGAAAGGCTACAAGGTTCCAGAGAACATAATGGTCATGAATTTGTCCCACTGTTCCCAACTAGAAACTCTTCCTGATCTCTCTGGGTGTCAACGTTTAGAGAAGATTGTCCTTGATAACTGCTCTAAACTAAGTAGGATTGATGAATCGGTTGGCAATTTGGCTGCACTTCGTGATTTGAATCTGACTCGTTGTAGAGAACTTAATGAGTTACCCAATGGTATATCTTGGCTGAAAAATCTAGAGAGCCTCTGTATTTCTGAGTGCTCAAAGTTGAAATCGTTGCCAGAAAATATGGTGAACTTGAAATCACTGAGGAAACTTCTTGCTGATCACACGGCTTTAGAAAAGCTGCCTGAGACTATATTTCATCTTGAAAAACTTGAAACTCTTGTTTTAAGTGATTGCCATCAATTGAAAAGGCTGCCAGACAACGTAGGACTCTTGGGTTCTCTGCAAGAGCTGTCTCTGGACCAATCTGGATTAGAGGAACTCCCCAACTCTGTTGGGCGTTTGAAAAACCTAGAAAAGCTTGGTTTGATGCATTGTAAATCTCTCACTATGATTCCTGATTCTATTGGAAATCTCAAATCACTTTCAGAGCTTCGTCTTTTTGGTAGTGCTATTGAAGAGATTCCTTCTTCGATTGGATCATTGTCTTATCTAAAAGAACTCTCATTAGGAAACTGTATGTCTCTGAATAAACTGCCTGAGTCCATTAAGTCTTTGGTTTCCATTGTTGAGCTTCAGTTAGATGGGGCTGCGATCACATATTTACCAGATGAGATTGGAAATATGACGTTACTTAAAAAGCTTGAAATGAGGAATTGCCGGATGAGATATCTTCCTGAATCGATTGGCTACCTCACAGCACTTACAACCTGGAACATTTTCAAAGGTAACATTGTAGAACTGCCAGAGTCCATCGGAAACCTCGAGAATTTAGTCTTTTTAAAGTTGGACCAATGCAAAATGCTCAGAAGGCTTCCACATTCTATAGGACATTTGAAGTCCTTATATCATCTTTTGATGGAGGAAACAGGTCTGACGGAATTACCTCAAAGCTTTGGCATGCTTACCAGCTTAAGGACGTTGAAAATGGCCAGGAAGTCAGAAAATAACATGCTTCAGGATTCTTTTGTAATCTCATCTTTCTTCTGCAATATGATATTTCTGAATGATCTGGATGCTCGTGGTTGGAGGATATCTGGGAAAATTCCCGATGAATTTAAGAACTGTTCGTCTTTGGAGACTTTGAATCTAAGTCAAAACATATTTCACAGCCTTCCTTCTAGTTTGGTGGGCCTTTCGATTCTCAAGAAACTCTCTCTTCAAAACTGCACCGAGCTGGTTTCTCTCCCTGCTCTTCCCTCAAGCTTGGTAGAGCTGAATGCTGCAAACTGTTGTGCCTTACAAAGCATTCATGACCTTTCAAATTTAAAGAGTTTAAGGGATCTGAACCTCACAAATTGTGTGAAATTGGTGGATATTCCTGGCCTTGAACGGTTAGAGTCTCTGAGGTTTTTGTATTTGAGTGGATGCCTTGAATGTTCCTCCACTGTCCGCAAGAGACTTTCTAAGGTTACACTGAGGAATTTATTGAACTTGAGCATGCCAGGAACAAGATTACCTAAATGGTTTTCAGGACAAAAAGTAAGCATTTCGAAACCCAAGAACCTTGAACTAACTGGTGTAATTATAGGTATCATTCTTTCAATCAACCATGATATACCTAGTGAACTGCGAGATCTTCCTGGAGTAGTTGATATCATAGTAAAAGTCTTCAAACTGGGCAAAAATATATGTACTTCAGGATTGGACTTGCGCGGATTGCCAAAAACCAATCAAGAACACATGTATCTTTGTAGGTACCCTGATTTCCATCATCTCTTCTCTTTCTTGCGAGATGGTGACACATTATGTGTGACTCGGTTAAACCCACCTCTGGATAAGGGGTTGGAGTTGAAAAAATGTGGGGTTCATTTGATCTTTGAAGGGGATGATGATTACGGTGGTGCTGAAGAATCTGTGGACAGAGAACTAAAATCTGTGTCAGAAAAATTGGCGGAGTTTTTCAGCACTTGTGAAGAAGGAAGCTCCAAAGATGGAATTGAGAGTGAAGATGATGATGAATGCCAAAAGCAATTAGAGACTCAAGAAAAGGAAAACAGAACCTCATCATCATCTATTCCCAGCAACTCCTATTTGCTCTATTTTATTAGTCTGTTCGTTTTGTTGTTGAGCTGGCTGCTAATGAAATTTGTCTTTAGCTATGATGCACAGTAG 4287 0.4196 MSTDGHVISSTPGAFRLRWDVFLSFRGADTRNCFTIPLYKALQSRGVRVFLDDVGLNRGDHIAPSLIEAIRDSAASIIVISPDYASSHWCLEELAEICDCRRLILPVFFNVNPRDVRKQEGPFKDSFEDHKAKRKQEDVLRWREAMKEVGGIAGSPFSHPSEKEEGFAEERDDLIRLLVTRILRELSNAPVGVAEFTVGLDARIERLLELLDMRSNGIGVLGLYGMGGIGKTTLAKALFNRLVVDFERRSFISSVREVSSKDGGLVSLRDRIIGDISSQKVVGNDISTFRKTVCENRALIILDDVDDVKQLDILIGKREWFHEGSRVVVTSRSRQALAETYVNVFYEVLILDDSESLELFCYHAMRRKEPADNTFFKLSKEIVSLTGRLPLALEVFGSMLFGKRREKEWVDAVEKLKLIRPGDLQEVLKISYEGLDEQEKCIFLDIACLFVQMSMKREDVIDVLRGCGFKGEIAITVLTEKCLIKIREDETIWMHDQLRDMGRQIVVDENLVDPGMRSRLWDRSEILTVLRNLKGTRSVRGMVLDFEKRSPKDHRGEEVISWNNLQQGSSVTNALAFLKQMPKKYFQRAEKNREALVIHTKSFESMVSLGLLQINNLTLEGKFKSFPAELKWLQWHGCPLKCMPSDFCPQELAVLDLTRSNLENLWDLKGYKVPENIMVMNLSHCSQLETLPDLSGCQRLEKIVLDNCSKLSRIDESVGNLAALRDLNLTRCRELNELPNGISWLKNLESLCISECSKLKSLPENMVNLKSLRKLLADHTALEKLPETIFHLEKLETLVLSDCHQLKRLPDNVGLLGSLQELSLDQSGLEELPNSVGRLKNLEKLGLMHCKSLTMIPDSIGNLKSLSELRLFGSAIEEIPSSIGSLSYLKELSLGNCMSLNKLPESIKSLVSIVELQLDGAAITYLPDEIGNMTLLKKLEMRNCRMRYLPESIGYLTALTTWNIFKGNIVELPESIGNLENLVFLKLDQCKMLRRLPHSIGHLKSLYHLLMEETGLTELPQSFGMLTSLRTLKMARKSENNMLQDSFVISSFFCNMIFLNDLDARGWRISGKIPDEFKNCSSLETLNLSQNIFHSLPSSLVGLSILKKLSLQNCTELVSLPALPSSLVELNAANCCALQSIHDLSNLKSLRDLNLTNCVKLVDIPGLERLESLRFLYLSGCLECSSTVRKRLSKVTLRNLLNLSMPGTRLPKWFSGQKVSISKPKNLELTGVIIGIILSINHDIPSELRDLPGVVDIIVKVFKLGKNICTSGLDLRGLPKTNQEHMYLCRYPDFHHLFSFLRDGDTLCVTRLNPPLDKGLELKKCGVHLIFEGDDDYGGAEESVDRELKSVSEKLAEFFSTCEEGSSKDGIESEDDDECQKQLETQEKENRTSSSSIPSNSYLLYFISLFVLLLSWLLMKFVFSYDAQ 1428
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco11g0890 1428 ProSiteProfiles TIR domain profile. 17 190 IPR000157 GO:0007165
Acco11g0890 1428 Pfam TIR domain 19 159 IPR000157 GO:0007165
Acco11g0890 1428 SUPERFAMILY Toll/Interleukin receptor TIR domain 18 154 IPR035897 -
Acco11g0890 1428 SMART till_3 18 152 IPR000157 GO:0007165
Acco11g0890 1428 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 193 446 IPR027417 -
Acco11g0890 1428 PRINTS Disease resistance protein signature 790 806 - -
Acco11g0890 1428 PRINTS Disease resistance protein signature 292 306 - -
Acco11g0890 1428 PRINTS Disease resistance protein signature 220 235 - -
Acco11g0890 1428 PRINTS Disease resistance protein signature 386 400 - -
Acco11g0890 1428 Gene3D Ribonuclease Inhibitor 595 765 IPR032675 -
Acco11g0890 1428 Gene3D Ribonuclease Inhibitor 766 919 IPR032675 -
Acco11g0890 1428 Gene3D Ribonuclease Inhibitor 920 1289 IPR032675 -
Acco11g0890 1428 Gene3D - 350 436 IPR042197 -
Acco11g0890 1428 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 20 811 IPR044974 GO:0006952
Acco11g0890 1428 SMART LRR_typ_2 816 839 IPR003591 -
Acco11g0890 1428 SMART LRR_typ_2 1003 1025 IPR003591 -
Acco11g0890 1428 SMART LRR_typ_2 910 933 IPR003591 -
Acco11g0890 1428 SMART LRR_typ_2 1080 1103 IPR003591 -
Acco11g0890 1428 SMART LRR_typ_2 863 886 IPR003591 -
Acco11g0890 1428 SMART LRR_typ_2 769 792 IPR003591 -
Acco11g0890 1428 SMART LRR_typ_2 721 745 IPR003591 -
Acco11g0890 1428 SUPERFAMILY L domain-like 900 1209 - -
Acco11g0890 1428 MobiDBLite consensus disorder prediction 1365 1396 - -
Acco11g0890 1428 SUPERFAMILY L domain-like 494 927 - -
Acco11g0890 1428 Gene3D - 15 186 IPR035897 -
Acco11g0890 1428 Pfam NB-ARC domain 202 418 IPR002182 GO:0043531
Acco11g0890 1428 Gene3D - 187 344 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco11g0890 Acco-ChrAcco11 19351733 19357879 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco11g0890 19 892 WRKY Transcription Factor Family AT4G12020 28.779 4.52e-73 268