Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Acco11g0880 | ATGGACCAACAAGTTCTTGTGGATGAAAACTTTCCACTCTTCTCCAAGTCTCGTAAATCCTCAAAAAAACACTTGCCAGCTGCCCCAACTGCTACAGCCACCACCGCTGCTGCCACCAAAGATATCAACTTTGATAGCCAACACTTTGGAAAGTCAGATGACACAGTTCTTGATTCCACCAATCCTAGTACTTTTGCGGAGCTTGGACTTGCTGAATGGGCTGTGAAGACTTGCAAAGAGCTCGCAATGCGCAAGCCTCGACAAGTCCAATTACATTGCATCCCAAAGATCCTAGATGGCCGCCATGTGCTTGGCATTGATGAGACAGGAAGTGGTAAGACTGCGGCATTTGCTCTACCAATTCTTCACAGACTGGGTGAGCATCCTTTTGGGGTTTTTGCTTTGATTTTGACGCCAACAAGGGAGTTGGCATATCAACTTGCAGAACAATTTAGGGCATTGGGTTCATGCTTGCATGTGCGGATAGCTGTGGTGGTTGGAGGGACAAATATGTTGGAGCAAGCCAAGATTTTAACATCCAGGCCGCATGTTGTGATTGCCACACCAGGAAGAATCAAGGTTTTGCTTGAGGATAATCCTGATATTCCTCCAGTGTTTTCTAGAACTAAGTTCCTTGTCTTGGATGAAGCAGATCGGGTTCTTGATGTTGGCTTTCAGGATGATTTGAAGTTGATCTTTCAGTGCTTACCTGAAAGTCGGCAAAACCTATTTTTTTCTGCAACTACGACAAGTAATCTACAGAAGCTGCATGAGCGTTACCAAGACAAGCTCTATGTCTATGAGGCATATCAAGGCCTGAAAACAGTTGAGACGCTCAAGCAACAAATTATATTTGTTCCCAACAAAGTCAAGGAGGTTTATTTAATGCATATATTGTCCAAAATGGAAGATATGGGCATTCGTTCTACCATTGTTTTTTTCTCTACATGCAGAGATTGTCATCGTTTAAGTTTAATGCTAGAAGTACTCGATCAAGAAGCTGCAGCTCTCTATTCATTCAAATCACAGAATCGGAGACTTGAAGCACTTCATCAATTTAAATCAGGAAAGGTTTCTATACTGCTTGCAACTGATGTTGCCAGCCGAGGTTTGGACATTCCTACAGTTGATCTAGTTATCAATTATGATGTCCCAAGGTTTCCTAGGGATTATGTCCATCGTGTTGGTCGAACTGCAAGAGCAGGTAGAGGAGGACTGGCTGTGAGCATTGTTACCCAGAATGATGTCAATCTCATTCATGAAGTAGAAGCTCTTATTGAAAGGCAACTTGAGTTGGTCGAGTACAAGGAGAATGAAGTGCTTACTCTGATGAAAAAGGTTTTCAGTGCTAAAAATGTTGCCGAAATGAAAATGTTGGATGATGGCTTTGAGGAGAAAGCAGAAGAGCGGAAAAAACAGAAACTGCAAATGTTAGCTGAAAAAGGATTATTAAAGAAAGAGAGCAAAAAAAGGAAAAGAAATAAAGGCATCAAGGAAGGAGGAGAAGAAAACAAAGAGGAAGTGGAAACGTTACCAGACAAAAAAGGATCACTTAATAAAAAGAGTGAGAAGAGGAGGTGA | 1581 | 0.4194 | MDQQVLVDENFPLFSKSRKSSKKHLPAAPTATATTAAATKDINFDSQHFGKSDDTVLDSTNPSTFAELGLAEWAVKTCKELAMRKPRQVQLHCIPKILDGRHVLGIDETGSGKTAAFALPILHRLGEHPFGVFALILTPTRELAYQLAEQFRALGSCLHVRIAVVVGGTNMLEQAKILTSRPHVVIATPGRIKVLLEDNPDIPPVFSRTKFLVLDEADRVLDVGFQDDLKLIFQCLPESRQNLFFSATTTSNLQKLHERYQDKLYVYEAYQGLKTVETLKQQIIFVPNKVKEVYLMHILSKMEDMGIRSTIVFFSTCRDCHRLSLMLEVLDQEAAALYSFKSQNRRLEALHQFKSGKVSILLATDVASRGLDIPTVDLVINYDVPRFPRDYVHRVGRTARAGRGGLAVSIVTQNDVNLIHEVEALIERQLELVEYKENEVLTLMKKVFSAKNVAEMKMLDDGFEEKAEERKKQKLQMLAEKGLLKKESKKRKRNKGIKEGGEENKEEVETLPDKKGSLNKKSEKRR | 526 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Acco11g0880 | 526 | MobiDBLite | consensus disorder prediction | 494 | 519 | - | - | |
Acco11g0880 | 526 | CDD | SF2_C_DEAD | 279 | 411 | - | - | |
Acco11g0880 | 526 | SMART | helicmild6 | 321 | 402 | IPR001650 | - | |
Acco11g0880 | 526 | MobiDBLite | consensus disorder prediction | 470 | 485 | - | - | |
Acco11g0880 | 526 | Pfam | DEAD/DEAH box helicase | 88 | 256 | IPR011545 | GO:0003676|GO:0005524 | |
Acco11g0880 | 526 | ProSiteProfiles | Superfamilies 1 and 2 helicase C-terminal domain profile. | 278 | 441 | IPR001650 | - | |
Acco11g0880 | 526 | SUPERFAMILY | P-loop containing nucleoside triphosphate hydrolases | 131 | 419 | IPR027417 | - | |
Acco11g0880 | 526 | SMART | ultradead3 | 82 | 282 | IPR014001 | - | |
Acco11g0880 | 526 | MobiDBLite | consensus disorder prediction | 470 | 526 | - | - | |
Acco11g0880 | 526 | ProSitePatterns | DEAD-box subfamily ATP-dependent helicases signature. | 213 | 221 | IPR000629 | - | |
Acco11g0880 | 526 | Gene3D | - | 30 | 267 | IPR027417 | - | |
Acco11g0880 | 526 | Gene3D | - | 274 | 521 | IPR027417 | - | |
Acco11g0880 | 526 | ProSiteProfiles | Superfamilies 1 and 2 helicase ATP-binding type-1 domain profile. | 94 | 267 | IPR014001 | - | |
Acco11g0880 | 526 | Pfam | Helicase conserved C-terminal domain | 306 | 402 | IPR001650 | - | |
Acco11g0880 | 526 | PANTHER | ATP-DEPENDENT RNA HELICASE RHLE-RELATED | 30 | 509 | - | - | |
Acco11g0880 | 526 | CDD | DEADc_DDX49 | 65 | 268 | - | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Acco11g0880 | Acco-ChrAcco11 | 19114841 | 19119576 | Dispersed/Wgd |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Acco11g0880 | 36 | 419 | Eukaryotic Initiation Factors Gene Family | AT3G13920 | 32.250 | 2.27e-58 | 197 |