Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco11g0876 ATGAGCGGATGGGACAGGTTTCGAACATCATCATCGTCTTCTTCGAGATCGCCTCATGGAATGGATTCTAATGCCTTTCGAGACCTCCCCAACCGCATACCTTCCAGTCGAACTATTCAACTCGGTCGAGTCCAGCCCCAAGCTCCTGGTCATCGTACCGTTTTCTGCAACGATCGCGATGCCAACGCTCCTGTCCGATTCAAGGGGAATTCGATATCGACCACAAAATACAATGTTCTCACTTTCTTGCCAAAAGCTCTGTTTGAACAGTTTAGGCGGGTGGCTAATCTGTACTTTCTTACAATCTCAATTTTGTCAACCACACCTATGAGTCCTGTGTCTCCAATAACTAATGTGGCTCCGTTATCATTGGTGCTTCTTATCTCTCTTGGAAAGGAAGCTTTTGAAGACTGGAAGCGTTTTCAGAATGACTTGGCCGTAAACAACAATTTGATAGATGTTCTGCAAGACCAAAAGTGGGTTTCCATGCCCTGGAAAAGGGTTCAAGTTGGAGATGTTATCAGGGTTAAGCAGGATGGGTTCTTTCCTGCAGATCTGCTTTGCCTGGCCAGTACCAATCCTGATGGTGTCTGCTACATTGAGACTTCCAATTTGGATGGGGAAACCAATTTGAAGATTAGGAAAGCATTGGAAAAGACTTGGGATTACTTGATTCCAGAGAAGGCATCTGAGTTTAAAGGTGAAGTTCAGTGTGAACAACCAAACAATTCATTGTATACCTTCACTGGAAATCTTATATTTCAAAAGCAAACACTGCCTCTCAGTCCTAACCAACTTTTATTGCGAGGGTGCAGCCTCAGGAATACAGAATATGTTGTTGGGGTTGTTATTTTTACCGGACATGAAACAAAGGTAATGATGAATACAATGAATGTTCCTTCCAAAAGAAGTACATTGGAGAGAAAGCTTGACAAGCTCATACTTGCTCTGTTTGCGACTCTCTTTGTGATGTGTTTACTTGGAGCCATTGGCAGTGGCATCTTCGTAAGCAACAAGTATTTCTACTTACGTCCTAATGCAGGTGATGAGGGTTCTGGTCAGTTCAACCCAGGGAATAGACTTTTGGTTATTACTTTGACTATGTTTACCCTGATCACTTTATACTCATCAATCATCCCAATTTCACTTTATGTTTCAATAGAGATGATCAAATTTATTCAGTGTACTCAGTTTATCAACAAAGATTTGCGCATGTATCACAGTGAGACCAATACCCCTGCATTGGCCAGAACTTCCAATCTAAATGAAGAACTCGGGCAGGTGGAATATATCTTCTCTGACAAAACTGGTACACTAACAAGAAACTTAATGGAGTTCTTCAAGTGCTCAATTGGAGGGGAGATCTATGGAAATGGCATCACTGAAATTGAGAGAGGACTAGCTGAACGCAATGGCATTAAAATTCAGGCAGAAAATCAATCAGCCAATGTAGTGCAAGAAAAGGGATTTAATTTTGATGATGCAAGGCTTATGCGTGGAGCCTGGAGGAATGAGCCTAATCCTGATAGTTGCAAGGAATTTTTCAGATGCCTTGCTATATGCCATACTGTACTTCCTGAGGGTGATGAGTCCCCTGAAAAGATCAGATATCAAGCAGCATCACCTGATGAGGCTGCTTTGGTCATTGCTGCAAAGAACTTTGGTTTCTTCTTTTACAGGCGCACACCTACCTCAATATATGTTCGTGAATCTCATGTGGAGAAGATGGGCAAAATTCAGGATGTGTCTTATGAGATTTTGAATGTGCTTGAGTTTAACAGTACAAGGAAGCGTCAGTCTGTTGTATGTCGTTATCCAGATGGGAGACTTGTGTTGTACTGTAAGGGTGCTGATAGTGTAATCTATGAGAGATTGGCTGATGGTTATAATGATATAAAGAAAGTGACTAGGAATCATTTGGAACAATTTGGATCTTCTGGACTACGTACTTTATGCCTAGCCTACAAAGAATTGCCTCCTGATGTGTATGAAAGCTGGAATGAAAAGTTCATCCATGCCAAGTCATCTCTCCGTGATCGTGAAAAGAAGTTAGATGAGGTGGCAGAACTTATAGAAAATGGGCTTGTTTTGATTGGTTGCACTGCCATAGAAGATAAGCTTCAAGAAGGAGTACCGACTACTATAGAGACTCTTCAAAGGGCTGGCATTAAAATTTGGGTTCTTACAGGAGATAAGATTGAAACAGCCATAAATATTGCCTATGCATGCAATCTAATAAACAATGAGATGAAGCAATTTGTCATCAGTTCTGAAACCGATGTAATTAGAGAAGCTGAGGAAAGGGGTGACCAAGTGGAAATTGCACATGTTATGAAGGAAGAAGTTAAAAAGGAGCTGAAGAAGTGCCTTGAGGAAGCACATAGCTGCCTTTCATCTCTATCTGGACCTAAATTAGCACTTGTAATTGATGGAAAATGTCTAATGTATGCATTAGATCCTAGTTTAAGAGTGATGCTGCTGAATTTGAGTTTAAATTGCCATGCAGTTGTTTGTTGCCGAGTTTCTCCTTTACAGAAAGCACAGGTCACAAGTTTGGTTAAAAAAGGTGCACGGAAAATAACTCTTAGTGTTGGAGATGGAGCCAATGATGTCAGCATGATTCAGGCTGCTCATGTTGGTGTTGGCATAAGTGGGCTGGAGGGGATGCAAGCTGTAATGGCTAGCGATTTTGCCATTGCACAGTTTCGTTACCTTGCAGATTTATTACTTGTTCATGGCCGGTGGTCATATCTTCGAATATGCAAGGTGGTGACATACTTCTTTTACAAGAATCTCACGTTCACTCTTATTCAGTTTTGGTTTACTTTTCAAACTGGGTTTTCTGGTCAGAGGTTCTACGATGATTGGTTTCAGTCATTATATAATGTGATCTTCACAGCACTACCAGTGATCATTGTTGGACTATTTGACAAGGATGTCAGTGCATCTCTTTCCATGAAGTACCCTGAGCTGTACATGGAGGGGATAAGAAATGTCTTCTTCAAATGGAGAGTTGTGGCATTATGGGCCTTTTTTTCCGTTTACCAGTCTCTAATATTGTACTATTTTGTTAGTACAGCAAGTTTAACTGCTAAAAATTCAGCTGGCCAAACATTTGGAGTTTGGGATGTCAGTACATTGGCGTTCACATGTGTAGTAATAACTGTGAACTTGCGGCTTCTTATGATTTGTAATTCAATTACAAAGTGGCACTTTATTAGCGTTGGTGGAAGTATATTAGCATGGTTTATTTTTGCTTTCATATATTGCGCCATCATAGAAAAGGGGAACACTTATTTTGTCATATACGTCTTGATGAGTACGATCTATTTCTACCTCACAATTATATTTGTACCGGTTGTTGCACTTTTTGGGGACTTTGTATATCAAGGGGTTCAAAGATGGTTCTTCCCCTATGACTACCAGATTGTTCAGGAAATGTATCGACACGAAGTGGAGGGCACTAGCAGGGCACGGCTGCTGGAGATAGAGAACCAGCTTACACCAGCCGAGGCAAGAAGCTACGCTATATCTCAACTCCCGCGCGAGATCTCGAAGCACACAGGCTTTGCTTTTGATTCACCAGGGTACGAGTCCTTTTTCGCTGCACAGTTAGGTGTATTTGCCCCACAGAAGGCATGGGATGTTGCCCGAAGAGCTAGTACCAAGACAAAGCCTATAGTCCAGAAAAAATGA 3696 0.4145 MSGWDRFRTSSSSSSRSPHGMDSNAFRDLPNRIPSSRTIQLGRVQPQAPGHRTVFCNDRDANAPVRFKGNSISTTKYNVLTFLPKALFEQFRRVANLYFLTISILSTTPMSPVSPITNVAPLSLVLLISLGKEAFEDWKRFQNDLAVNNNLIDVLQDQKWVSMPWKRVQVGDVIRVKQDGFFPADLLCLASTNPDGVCYIETSNLDGETNLKIRKALEKTWDYLIPEKASEFKGEVQCEQPNNSLYTFTGNLIFQKQTLPLSPNQLLLRGCSLRNTEYVVGVVIFTGHETKVMMNTMNVPSKRSTLERKLDKLILALFATLFVMCLLGAIGSGIFVSNKYFYLRPNAGDEGSGQFNPGNRLLVITLTMFTLITLYSSIIPISLYVSIEMIKFIQCTQFINKDLRMYHSETNTPALARTSNLNEELGQVEYIFSDKTGTLTRNLMEFFKCSIGGEIYGNGITEIERGLAERNGIKIQAENQSANVVQEKGFNFDDARLMRGAWRNEPNPDSCKEFFRCLAICHTVLPEGDESPEKIRYQAASPDEAALVIAAKNFGFFFYRRTPTSIYVRESHVEKMGKIQDVSYEILNVLEFNSTRKRQSVVCRYPDGRLVLYCKGADSVIYERLADGYNDIKKVTRNHLEQFGSSGLRTLCLAYKELPPDVYESWNEKFIHAKSSLRDREKKLDEVAELIENGLVLIGCTAIEDKLQEGVPTTIETLQRAGIKIWVLTGDKIETAINIAYACNLINNEMKQFVISSETDVIREAEERGDQVEIAHVMKEEVKKELKKCLEEAHSCLSSLSGPKLALVIDGKCLMYALDPSLRVMLLNLSLNCHAVVCCRVSPLQKAQVTSLVKKGARKITLSVGDGANDVSMIQAAHVGVGISGLEGMQAVMASDFAIAQFRYLADLLLVHGRWSYLRICKVVTYFFYKNLTFTLIQFWFTFQTGFSGQRFYDDWFQSLYNVIFTALPVIIVGLFDKDVSASLSMKYPELYMEGIRNVFFKWRVVALWAFFSVYQSLILYYFVSTASLTAKNSAGQTFGVWDVSTLAFTCVVITVNLRLLMICNSITKWHFISVGGSILAWFIFAFIYCAIIEKGNTYFVIYVLMSTIYFYLTIIFVPVVALFGDFVYQGVQRWFFPYDYQIVQEMYRHEVEGTSRARLLEIENQLTPAEARSYAISQLPREISKHTGFAFDSPGYESFFAAQLGVFAPQKAWDVARRASTKTKPIVQKK 1231
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco11g0876 1231 FunFam Phospholipid-transporting ATPase 541 696 - -
Acco11g0876 1231 Gene3D - 559 691 IPR023299 GO:0000166
Acco11g0876 1231 PANTHER PROBABLE PHOSPHOLIPID-TRANSPORTING ATPASE 40 1187 - -
Acco11g0876 1231 FunFam Phospholipid-transporting ATPase IC 429 441 - -
Acco11g0876 1231 Pfam Phospholipid-translocating ATPase N-terminal 54 118 IPR032631 -
Acco11g0876 1231 ProSitePatterns E1-E2 ATPases phosphorylation site. 434 440 IPR018303 -
Acco11g0876 1231 SUPERFAMILY Calcium ATPase, transduction domain A 150 293 IPR008250 -
Acco11g0876 1231 Pfam E1-E2 ATPase 152 388 - -
Acco11g0876 1231 FunFam Phospholipid-transporting ATPase 128 297 - -
Acco11g0876 1231 SFLD C1.7: P-type atpase like 414 915 - -
Acco11g0876 1231 FunFam Phospholipid-transporting ATPase 697 904 - -
Acco11g0876 1231 NCBIfam phospholipid-translocating P-type ATPase 67 1146 IPR006539 GO:0000287|GO:0005524|GO:0015914|GO:0016020|GO:0140326
Acco11g0876 1231 SUPERFAMILY HAD-like 420 906 IPR036412 -
Acco11g0876 1231 Pfam Cation transport ATPase (P-type) 530 624 - -
Acco11g0876 1231 Gene3D - 131 297 - -
Acco11g0876 1231 Gene3D - 694 904 IPR023214 -
Acco11g0876 1231 MobiDBLite consensus disorder prediction 1 32 - -
Acco11g0876 1231 PRINTS P-type cation-transporting ATPase superfamily signature 432 446 - -
Acco11g0876 1231 PRINTS P-type cation-transporting ATPase superfamily signature 864 883 - -
Acco11g0876 1231 Pfam Phospholipid-translocating P-type ATPase C-terminal 892 1138 IPR032630 -
Acco11g0876 1231 SFLD p-type atpase 414 915 IPR044492 -
Acco11g0876 1231 MobiDBLite consensus disorder prediction 1 21 - -
Acco11g0876 1231 CDD P-type_ATPase_APLT_Dnf-like 69 1024 - -
Acco11g0876 1231 SUPERFAMILY Metal cation-transporting ATPase, ATP-binding domain N 439 703 IPR023299 GO:0000166
Acco11g0876 1231 SUPERFAMILY Calcium ATPase, transmembrane domain M 66 1138 IPR023298 -
Acco11g0876 1231 NCBIfam HAD-IC family P-type ATPase 837 943 IPR001757 GO:0005215|GO:0005524|GO:0016020|GO:0016887
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco11g0876 Acco-ChrAcco11 19051853 19076644 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco11g0876 31 1231 Primary Pumps ATPases AT1G59820 77.842 0.0 2016