Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco11g0857 ATGAGCGTGGCGGTGCCATTACTGGCGGCGGTGGTAAAGATGACGAAGAAGATATGTGAGGTTGTGGATGGGTTGAAACCAACCATATTAATGGTGCTGGCTCAACTATTTTATGTTGGCGTTAACATTCTTTACAAGCTTGTCTTTTATGATGGCATGAACTTACGAATTGTGATCGTTTACCGTTTTGTTTTTGCCACTGCTTTTATGGCTCCTCTTGCTCTTATTTTGGAAAGGAAGAAGAGGCCAAAGATGACTTGGACTATACTGTTTCAGGGTCTTATATGTGGCTTGTTTGGTGGAACATTGTCACAAATATTTTACTTGGAGATGCTGACCTTAACAACAGTGACGTTTGCATCAGCCATCAACAATCTCGTTCCAACCGCTACATTTATTTTGGCCCTCCTCTTTCGATTGGAAAAATTGAATTGGAATGCCGCAGCCGGTAAAGCCAAGATCATTGGAACCCTTGCGGGAACCAGTGGGGCCATGCTGCTAACGTTCTATAGAGGTGCACGGATACCCACACCTTCCTTCCACGTCACGTTTTTGCATCCCCACAAAAGCCACGTGGCATCATCCCACTCTTCCTCGGGTGGTAACACCCTCTTAGGGGCACTCTGTGGCTTGGGTTACGTCTCGTCTTATTCTTTGTGGCTCATCGTTCAGGGGAAGATGAGTGAGAGATATCCATGTCATTATTCAAGCACGACATTGATAAATATGACAGCTTCCGTGTTTTCTACTGGCTTTGCTCTTTGCACTGTAAGGGATTGGAGTCAGTGGAAATTGGGTTGGAACATAAGACTCTTAACAGTAGCTTATGCGGGACTAGTGTCAGCAGGGTTGTGTACGGTGATCATTGCATGGTGTGTATGCAAGGGAGGACCTCTATTCATATCAGTATTCAATCCTCTCCAGCTTTTGTTCTTGGCTTTTGTTGGATCTTTCTTTATGGATGAGATGCTTCATCTTGGAAGTATAATTGGAGGAGTAATGATAGTATGTGGACTATACCTGGTTTTATGGGGCAACGGCAAAGAGATGAAGAATAAGAATCTTCTGGGAGCATCCAAAACCCTCCACGTGTCATCATCTCCTGAAATCATCGTCAAATCTTCTATGGATGATGTCAAAAGCAACTGCGAGTATAATAATAATATTAGCACTTCAAACCTTGATAGGGATCATAGCCAATTTTCATCCCAAAAGGGTAAAAAATAA 1227 0.4328 MSVAVPLLAAVVKMTKKICEVVDGLKPTILMVLAQLFYVGVNILYKLVFYDGMNLRIVIVYRFVFATAFMAPLALILERKKRPKMTWTILFQGLICGLFGGTLSQIFYLEMLTLTTVTFASAINNLVPTATFILALLFRLEKLNWNAAAGKAKIIGTLAGTSGAMLLTFYRGARIPTPSFHVTFLHPHKSHVASSHSSSGGNTLLGALCGLGYVSSYSLWLIVQGKMSERYPCHYSSTTLINMTASVFSTGFALCTVRDWSQWKLGWNIRLLTVAYAGLVSAGLCTVIIAWCVCKGGPLFISVFNPLQLLFLAFVGSFFMDEMLHLGSIIGGVMIVCGLYLVLWGNGKEMKNKNLLGASKTLHVSSSPEIIVKSSMDDVKSNCEYNNNISTSNLDRDHSQFSSQKGKK 408
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco11g0857 408 PANTHER WAT1-RELATED PROTEIN 27 354 IPR030184 GO:0016020|GO:0022857
Acco11g0857 408 SUPERFAMILY Multidrug resistance efflux transporter EmrE 257 348 - -
Acco11g0857 408 SUPERFAMILY Multidrug resistance efflux transporter EmrE 61 156 - -
Acco11g0857 408 Pfam EamA-like transporter family 205 343 IPR000620 GO:0016020
Acco11g0857 408 Pfam EamA-like transporter family 27 155 IPR000620 GO:0016020
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco11g0857 Acco-ChrAcco11 18453820 18457483 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco11g0857 25 395 Nodulin-like Gene Family AT1G25270 38.874 3.85e-90 275