Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco11g0853 ATGTGTTTCACCCTGCCATCTGTTACCATTAGCATCTCCAGGTGCTCTATGGGTGGCTTTTTGCCTAATCGTTATCGGTGTAAAGCAATCCCCCTGTGCACGCCTCCAATTTCTTCAAAGGGGATCAGGGTGGATAAATGGGAAATCGTTGAAAACAATGTGACATGGGTGCCTTTTGTTGATTTTGATGTTGCATTTTCTAGAGCATCTGATGATATCGATGTTGAAGATGGCCAACATGAGGACCCTTTCAAGACAAAATTCAGTTTATGGATCCAGTTATGTTCACCTCACATGAGGGGTTTTCAAAGGATCAGGATGATGGAGAATGAGTATGGACCTTGTAACTTTCTGTTGGAAGAATCGAAAATGTCACGGAAAGGTTTGATGGAACAGGATCTTAGTAAACTGGATGTAACAAAATTGCATCCACTTTCTCCAGAAGTCATATCTCGTCAGGCTACCATTAATATTGGCACCATAGGCCATGTGGCTCATGGCAAGTCAACAGTGGTTAAAGCAATATCAGGTGTTCAGACTGTTCGATTTAAAAATGAGTTGGAACGTAACATTACAATCAAGCTTGGATATGCAAATGCAAAGATATACAAGTGTGAAGATGAACGGTGTCCCAGGCCCATGTGCTACAAGGCATATGGAAGTGGAAAAGAAGACAGTCCTATGTGTGACGTGCCAGGATATGAAAACTGCAGGATGAAATTGTTGAGACATGTTTCTTTTGTTGATTGCCCGGGCCATGATATTCTTATGGCTACCATGCTCAATGGAGCTGCAATTATGGATGGAGCTTTATTACTTGTTGCTGCAAATGAGAGTTGTCCACAACCACAAACCTCTGAGCATCTGGCTGCTGTGGAAATTATGCGTTTGCAACACATAATAATTCTTCAGAATAAGGTTGATCTGATTCAAGAAAATGTGGCTATCAATCAGCATGAAGCGATTCAGAAGTTTATACAAGGAACTGTTGCTGATGGTGCGCCTGTAGTCCCAATTTCAGCCCAGTTAAAGTATAATATAGATGTTGTTTGTGAGTACCTTGTGAAAAGGATCCCAATCCCTGAAAGGAACTTTGTCTCTCCACCTAATATGATTGTAATCCGATCTTTTGATGTCAATAAGCCTGGGTTTGAAGTTGGTGAAATTAAAGGAGGTGTAGCTGGTGGAAGCATTCTCAGGGGTGTTTTGAGGGTAAACCAAATCATTGAAGTTCGACCTGGAATAATTGTCAAGGACGAGAGTGGGAATACAAGATGCACACCCATATACTCTAGAATAGTTTCATTATACGCTGAACAGAATGAGCTTCAATTTGCTGTGCCTGGAGGTCTAATTGGTGTGGGCACAACCATGGATCCCACGTTGACACGTGCAGACAGATTGGTGGGGCAAGTTCTTGGAGAGGTTGGGTCACTGCCTGAGGTTTATGTTGAACTTGAGGTGAACTTCTTTTTGCTTCGAAGGCTTCTTGGTGTCCGGACAAAAGGGTCTGAGAGACAAGGAAAGGTATCCAAGCTTGCCAAAGCAGAGATCCTAATGTTGAACATAGGATCAATGTCATCAGGGGCTAGAGTTGTTGCAGTGAAGAATGATTTGGCAAAGTTGCAACTGACTTCCCCAGTGTGCACCAGTAGAGGGGAGAAGATTGCGCTGAGTAGGCGTGTTGAGAAGCATTGGCGTCTGATTGGGTGGGGCCAAATCCAAGCAGGAACCACCATTGATATACCAGCTGCTCCTGTTCTGATTTAA 1770 0.4316 MCFTLPSVTISISRCSMGGFLPNRYRCKAIPLCTPPISSKGIRVDKWEIVENNVTWVPFVDFDVAFSRASDDIDVEDGQHEDPFKTKFSLWIQLCSPHMRGFQRIRMMENEYGPCNFLLEESKMSRKGLMEQDLSKLDVTKLHPLSPEVISRQATINIGTIGHVAHGKSTVVKAISGVQTVRFKNELERNITIKLGYANAKIYKCEDERCPRPMCYKAYGSGKEDSPMCDVPGYENCRMKLLRHVSFVDCPGHDILMATMLNGAAIMDGALLLVAANESCPQPQTSEHLAAVEIMRLQHIIILQNKVDLIQENVAINQHEAIQKFIQGTVADGAPVVPISAQLKYNIDVVCEYLVKRIPIPERNFVSPPNMIVIRSFDVNKPGFEVGEIKGGVAGGSILRGVLRVNQIIEVRPGIIVKDESGNTRCTPIYSRIVSLYAEQNELQFAVPGGLIGVGTTMDPTLTRADRLVGQVLGEVGSLPEVYVELEVNFFLLRRLLGVRTKGSERQGKVSKLAKAEILMLNIGSMSSGARVVAVKNDLAKLQLTSPVCTSRGEKIALSRRVEKHWRLIGWGQIQAGTTIDIPAAPVLI 589
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco11g0853 589 PRINTS GTP-binding elongation factor signature 300 309 IPR000795 GO:0003924|GO:0005525
Acco11g0853 589 PRINTS GTP-binding elongation factor signature 157 170 IPR000795 GO:0003924|GO:0005525
Acco11g0853 589 PRINTS GTP-binding elongation factor signature 246 256 IPR000795 GO:0003924|GO:0005525
Acco11g0853 589 PRINTS GTP-binding elongation factor signature 262 273 IPR000795 GO:0003924|GO:0005525
Acco11g0853 589 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 146 365 IPR027417 -
Acco11g0853 589 Gene3D - 153 363 IPR027417 -
Acco11g0853 589 Pfam Elongation factor Tu domain 2 391 473 IPR004161 GO:0005525
Acco11g0853 589 FunFam Eukaryotic translation initiation factor 2 subunit gamma 153 363 - -
Acco11g0853 589 FunFam Eukaryotic translation initiation factor 2 subunit gamma 480 579 - -
Acco11g0853 589 CDD eIF2_gamma_II 364 477 IPR044127 GO:0000049
Acco11g0853 589 CDD eIF2_gamma 156 363 IPR044128 GO:0005525
Acco11g0853 589 Pfam Initiation factor eIF2 gamma, C terminal 485 574 IPR015256 -
Acco11g0853 589 SUPERFAMILY EF-Tu/eEF-1alpha/eIF2-gamma C-terminal domain 478 575 IPR009001 -
Acco11g0853 589 SUPERFAMILY Translation proteins 363 477 IPR009000 -
Acco11g0853 589 Gene3D Translation factors 480 579 - -
Acco11g0853 589 ProSiteProfiles Translational (tr)-type guanine nucleotide-binding (G) domain profile. 153 362 IPR000795 GO:0003924|GO:0005525
Acco11g0853 589 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR 2 SUBUNIT 3 FAMILY MEMBER 124 582 - -
Acco11g0853 589 Pfam Elongation factor Tu GTP binding domain 155 359 IPR000795 GO:0003924|GO:0005525
Acco11g0853 589 Gene3D Translation factors 365 479 - -
Acco11g0853 589 FunFam Eukaryotic translation initiation factor 2 subunit gamma 364 479 - -
Acco11g0853 589 CDD eIF2_gamma_III 480 574 IPR015256 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco11g0853 Acco-ChrAcco11 18410956 18417815 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco11g0853 124 586 Eukaryotic Initiation Factors Gene Family AT1G04170 89.440 0.0 870