Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco11g0838 ATGGGTTTGTCGCGCGACTGGTTAATCTTTTCAGAGGAGGACGACAACGTTGCTGCAGCCGCTGATATGGTTCTCAAGACAGAGCTTTGTCGTTTTAGTGGGGGCAAGATCTACCCTGGGAAGGGCATCAGATTTGTTCGTGCTGATTCTCAGGTTTTTTTGTTTGCCAACTCAAAATGTAAGAGGTACTTCCACAACAGGTTGAAGCCTTCAAAGCTCACCTGGACTGCCATGTACAGGAAACAACACAAGAAGGACATAGCCCAAGAAGCTGTAAAAAAGAGGCGTCGTACCACCAAAAAGCCTTACTCTAGGTCTATTGTTGGTGCAACACTGGAAGTTATCCAGAAGAAAAGAACTGAGAAACCAGAGGTTCGAGATGCTGCTAGAGAAGCCGCTCTTCGTGAGATTAAGGAGAGGATTAAGAAAACAAAGGATGAGAAGAAGGCAAAGAAAGCAGAAGTAATGGCCAAGACACAAAAAGCACAAGGAAAAGGAAATGTTTCTAAGGGTGCTGGCCCTAAAGATCGTAAACTTGGTGGAGGTGGTGGGAAGCGCTGA 561 0.4581 MGLSRDWLIFSEEDDNVAAAADMVLKTELCRFSGGKIYPGKGIRFVRADSQVFLFANSKCKRYFHNRLKPSKLTWTAMYRKQHKKDIAQEAVKKRRRTTKKPYSRSIVGATLEVIQKKRTEKPEVRDAAREAALREIKERIKKTKDEKKAKKAEVMAKTQKAQGKGNVSKGAGPKDRKLGGGGGKR 186
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco11g0838 186 MobiDBLite consensus disorder prediction 140 186 - -
Acco11g0838 186 ProSitePatterns Ribosomal protein L24e signature. 32 49 IPR023442 -
Acco11g0838 186 Pfam Ribosomal protein L24e 26 89 IPR000988 -
Acco11g0838 186 Gene3D Ribosomal protein L24e 25 86 IPR038630 -
Acco11g0838 186 Coils Coil 134 161 - -
Acco11g0838 186 Gene3D - 91 163 - -
Acco11g0838 186 PANTHER 60S RIBOSOMAL PROTEIN L24 26 172 IPR000988 -
Acco11g0838 186 FunFam 60S ribosomal protein L24 25 86 - -
Acco11g0838 186 MobiDBLite consensus disorder prediction 140 158 - -
Acco11g0838 186 CDD Ribosomal_L24e_L24 25 78 IPR000988 -
Acco11g0838 186 SUPERFAMILY Glucocorticoid receptor-like (DNA-binding domain) 28 80 - -
Acco11g0838 186 SMART 4TRASH 30 68 IPR011017 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco11g0838 Acco-ChrAcco11 17801480 17804878 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco11g0838 23 179 Cytoplasmic Ribosomal Protein Gene Family AT2G36620 84.076 2.14e-86 249