Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco11g0816 ATGGAGGCGAACAAGAAGAGGAAGAGGGAGGTTCAAGAAGAAAATAAAGGCAACGAAATTATAAGGTACGATCAAGAAACTTTTACTCTACGTGAGCTGTATTTGATTCAGCAATTGCTGCTACCAAGGGAGATGAAGAAGATTAATGATATTGAGGGGAATCATCATGATATCAAACTGGTCTTAGAAAAGAAACTTTGCCAAATTGATGTGGGGAAATATGGATTCATAATTCCAGAATACCAAATATTGGAGGACGCCAGAGATCTTCTTAAACCCAATGAGGTTCTGAATTTGAAAAAAAATATGAGAAATATTTCTGTGAAGCTGTTGGATCAAAATCTTAAAGAATACAAATTGAATCTGTGTTGGCGGAAACTTGACAGCTTTTATAATCTGATTCAAGGTTGGTTGGATGTTGTAAGAAATAATAATCTCAAGCAAGATGAGAAGGTGCAACTATGGTCGTTTCGAAGGGATGATTTGGATTTGCATTGGTTAAGCTTACTCAATAAGAGAACATTCTACAGATTGCACTAG 540 0.3593 MEANKKRKREVQEENKGNEIIRYDQETFTLRELYLIQQLLLPREMKKINDIEGNHHDIKLVLEKKLCQIDVGKYGFIIPEYQILEDARDLLKPNEVLNLKKNMRNISVKLLDQNLKEYKLNLCWRKLDSFYNLIQGWLDVVRNNNLKQDEKVQLWSFRRDDLDLHWLSLLNKRTFYRLH 179
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco11g0816 179 PANTHER B3 DOMAIN PLANT PROTEIN-RELATED 7 162 IPR005508 GO:0003677
Acco11g0816 179 Pfam B3 domain-containing protein At2g31720-like 46 142 IPR005508 GO:0003677
Acco11g0816 179 Gene3D - 52 173 IPR015300 -
Acco11g0816 179 SUPERFAMILY DNA-binding pseudobarrel domain 61 165 IPR015300 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco11g0816 Acco-ChrAcco11 17154379 17154918 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco11g0816 57 162 B3 DNA Binding Superfamily AT1G05930 31.858 1.25e-06 45.4