Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco11g0815 ATGATGCCACCAAGAAAGGAAATGGATGAAGAAATGAAGACGAACAACAAGAAGAGGAAGAGGGAGACTCTAGAAGAAAATAAAGACAATGAAATTATAAGGTACGATCATCAAGATTCTAACAACCTTTTCTTCTATAGACCTCCACATTTGGTGAATCTGGTTCAGCAAGTGATGCAAAAGATTGAAAAGGATTTGGGAGGTCATGAAATCAAAACGGTGATACAAAAGAAGATTTGCAGATGTGATTTGAGTTTCCATGCCTTCTCAATTCCAGAAAACGAAATCTTGGAGGATGCCAGAGATTTTCTTAAACCTCACGAGGTTGAGTTTTTGAAAAAGACTTCAAGTCAAAGTATATCTGTGTCGCTGTTTGATCATAATCTTCAACAATTCCACATGTTTCTGAGTTGGTGGCAAATGAATAATCTTTCCTTTTATAATCTAAGTCATTGTTGGAAAGAGATTGTGCAACGTAATAATTTGAAGCTGGATGATATGGTGCAGTTATGGTCGTTTAGAAGGGATCATGATCTTGGATTTGCATTAGTCAAGCATACTCAATAA 567 0.3616 MMPPRKEMDEEMKTNNKKRKRETLEENKDNEIIRYDHQDSNNLFFYRPPHLVNLVQQVMQKIEKDLGGHEIKTVIQKKICRCDLSFHAFSIPENEILEDARDFLKPHEVEFLKKTSSQSISVSLFDHNLQQFHMFLSWWQMNNLSFYNLSHCWKEIVQRNNLKLDDMVQLWSFRRDHDLGFALVKHTQ 188
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco11g0815 188 PANTHER B3 DOMAIN PLANT PROTEIN-RELATED 11 186 IPR005508 GO:0003677
Acco11g0815 188 MobiDBLite consensus disorder prediction 1 25 - -
Acco11g0815 188 Pfam B3 domain-containing protein At2g31720-like 55 158 IPR005508 GO:0003677
Acco11g0815 188 Gene3D - 66 186 IPR015300 -
Acco11g0815 188 SUPERFAMILY DNA-binding pseudobarrel domain 100 184 IPR015300 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco11g0815 Acco-ChrAcco11 17138677 17139243 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco11g0815 59 183 B3 DNA Binding Superfamily AT1G05930 28.788 7.30e-11 58.2