Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco11g0802 ATGGGAAAAGATCCTGGGAAATGGATAAAGACATTGTTTTCAGGGAAGAAATCATCAAAGTCTAATCGATCAAGCAAAAAAAATAGCTTGAAACCTTCAAGTAACCTGGATGCTTTGGCCACTATTGAGGCATCTCTGCCTTATATCCCTGATTCTTCGCTGATATCCCCACCCACATCTGGAGCTGATGCTAGTAAAGAAGTACTCTTGGAAAAGGTAGACGTTAGTAGATCATCAAATGACAGAAATATTCTTTCAGCTGGGATTGAAGACAACAATGCAGAAGCTGTTGATTCTGGTTCTCCGGATGATGTTGAGAAAATCAGGCTTGCTGATGCAGCTACCAAAGTTCAGGCTGGTTTTAGGGGATATCAGGCTCGTCAGGCATTTCAAACACTAAAAGGTGCCATACAACTGCAAACTCTTATTCGTGGCAACTTAGTTAGGAGGCAAGCTGTTTCAACTTTACACTGTGTGAAGCGAATTGTAAAAGTTCAAGCTCTTATTCGCGGTCACAAGGTTCGACATTCTGATATTGAGGTTGCTGTCCTCAAGGATACTAAAAGTTCAAATTCTACTGGAGTAGTTACAATTGCACATGCAGAGAAGCTGGCAACTGGCATTTTTGTTAACGAGCTTCTGGCCTCGTCATCCTCAACAGCTCCGTTACATCTTAATTTTGATCCTGGTGAACCTAACTCCACTTGGAAGTGGCTTGAGCGTTGGACTAGGTCAAACTATTGGGCGCCTATTCCCAAATCAGAGAAGAAACATGACTTAAAGTCCAATGAGAAGAGTACCCATTGTCAAACCTTTGAACATAACAAGGGGAAACCTAAAATAAATGTCAAGAAAGCCTCTGGTTTGAAAGTTGATGATGGCTCAACCTCAGAGTCAAACACACTTAAACAGCCTGTAAAAAAGGTTTCAAGCCACCTGATGCAGTCATCACAGGAACATCCACAAAAGGATACGAAAAACCGTATTAAGAAAACTTCAATGCAGAGTGTTTCTAGTACATCTGAGGTTGCCCCTGAGAAAAAGAAACACATCACTGGAAAACTTCTGGTTAATGCTGTTACTGATGTTTCAGAGAATCGTGCTACTGATTCAGCAGATAAAATGAAAAGTTTGGGAGTGCCAAAATCGAAGCAATCTGATCTTGAAAAGAGCCTTGGGTTGCAAGCAAAAGATGATAATGGCCACTCAAACAAAAATCCAATCGCTGATTTCAAGACTAATGTAAAGAATGGTAAAGAAGTTATTCAAGGAGATAGCGAGGACTTGAAAATTAATGGGAACCCTCAGAACTCCCTAAGAAGAGCTTCACTGCCTGCCAGTTTCAACGATCAAGATAATAACAGTTCTCATAACACTCCAAGAGTTCCTAGCTATATGGCCCCTACTGAATCTGCAAAAGCTAAGCTAAGAGCACAAGGCTCTCCTGGGTTTGCTGGTGACTTGGTGGATAAAATTGGTATAAACAGGCGTCATTCACTTACAACTTCATTAAATGGCAAGTTTAGCTCATTTTCCCCAAGAACAGAACGACTGTTAAACACAAGCAACAGGGGTATGATCAGGACTGATAGATCTCTGTTATCAATAAGAGATGGAATTGTAGTTATACGCGTGGAGTTAAGAAGTTCATCCAACCCCGGTGGAGAAGGTGATGTTACATATTTTATTCAGTTCAAGGATATTTCAAAAGAGGAGGGTTTGCCATATTACAAGTCTCAGATTTGGAAGTGTTTTGTGTTATCTATGTCTAATTGTCCATGA 1782 0.4063 MGKDPGKWIKTLFSGKKSSKSNRSSKKNSLKPSSNLDALATIEASLPYIPDSSLISPPTSGADASKEVLLEKVDVSRSSNDRNILSAGIEDNNAEAVDSGSPDDVEKIRLADAATKVQAGFRGYQARQAFQTLKGAIQLQTLIRGNLVRRQAVSTLHCVKRIVKVQALIRGHKVRHSDIEVAVLKDTKSSNSTGVVTIAHAEKLATGIFVNELLASSSSTAPLHLNFDPGEPNSTWKWLERWTRSNYWAPIPKSEKKHDLKSNEKSTHCQTFEHNKGKPKINVKKASGLKVDDGSTSESNTLKQPVKKVSSHLMQSSQEHPQKDTKNRIKKTSMQSVSSTSEVAPEKKKHITGKLLVNAVTDVSENRATDSADKMKSLGVPKSKQSDLEKSLGLQAKDDNGHSNKNPIADFKTNVKNGKEVIQGDSEDLKINGNPQNSLRRASLPASFNDQDNNSSHNTPRVPSYMAPTESAKAKLRAQGSPGFAGDLVDKIGINRRHSLTTSLNGKFSSFSPRTERLLNTSNRGMIRTDRSLLSIRDGIVVIRVELRSSSNPGGEGDVTYFIQFKDISKEEGLPYYKSQIWKCFVLSMSNCP 593
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco11g0802 593 Gene3D - 108 158 - -
Acco11g0802 593 MobiDBLite consensus disorder prediction 254 280 - -
Acco11g0802 593 MobiDBLite consensus disorder prediction 367 388 - -
Acco11g0802 593 MobiDBLite consensus disorder prediction 254 347 - -
Acco11g0802 593 SMART iq_5 132 153 IPR000048 GO:0005515
Acco11g0802 593 SMART iq_5 157 179 IPR000048 GO:0005515
Acco11g0802 593 SMART iq_5 109 131 IPR000048 GO:0005515
Acco11g0802 593 MobiDBLite consensus disorder prediction 421 465 - -
Acco11g0802 593 ProSiteProfiles IQ motif profile. 110 138 IPR000048 GO:0005515
Acco11g0802 593 Pfam IQ calmodulin-binding motif 134 151 IPR000048 GO:0005515
Acco11g0802 593 Pfam IQ calmodulin-binding motif 160 175 IPR000048 GO:0005515
Acco11g0802 593 Pfam IQ calmodulin-binding motif 112 131 IPR000048 GO:0005515
Acco11g0802 593 MobiDBLite consensus disorder prediction 292 318 - -
Acco11g0802 593 MobiDBLite consensus disorder prediction 12 34 - -
Acco11g0802 593 ProSiteProfiles IQ motif profile. 134 161 IPR000048 GO:0005515
Acco11g0802 593 MobiDBLite consensus disorder prediction 429 465 - -
Acco11g0802 593 PANTHER IQ-DOMAIN 5-RELATED 1 503 - -
Acco11g0802 593 MobiDBLite consensus disorder prediction 14 34 - -
Acco11g0802 593 Pfam Protein of unknown function (DUF4005) 451 528 IPR025064 -
Acco11g0802 593 ProSiteProfiles IQ motif profile. 160 187 IPR000048 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco11g0802 Acco-ChrAcco11 16963676 16968843 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco11g0802 1 538 IQD Protein Family AT1G14380 33.895 4.72e-72 240