Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco11g0799 ATGGGTAATTGTTTACTTCCTGTGGAAATGAAGAATAATCTCGATCAACACACCGGAACCTCCAATTCTGGAGGAATATCAAAAGCTGGTACATCATCATCATCACCAGCTGCTTCAAGTTCCATATTACACGTTCAATCGTACAGATCAAAAGGAGGCACACCGTTAAGCATTGTTCTCCCGACGCCAACGCCGACAACGGAGGGTGAGATATTGTCATCACCTAATCTGAGGGCTTTCAGCTTCAATGAGCTCAAGAATGCGACGAAGAACTTCAGTAATGAAAACTATGTTGGAGAAGGTGGATTCGGCATCGTTTATAAGGGATGGATTGATCTGCGCAATTGCACGGCTTCAAAACCTGGTTCAGGAAGGGTTGTTGCCGTGAAGAAGCTTAAGCCTCAAGTTTTTCAAGGTCACAAGCAGTGGCTTACTGAAGTTAAGTACCTTGGGCGGCTGCATCATCGTAATTTAGTCACACTAATCGGCTACTGTTTGGAGGGGGAGAACAGATTATTGGTCTATCAGTTTTTGCCCAAAGGCAGCTTAGAGAATCACCTCTTGAAAAGTCAACCATTGCAATGGTCTGTGAGAATTAAAGTGGCCATTGAAGCTGCAAGGGGTCTCTCTTTTCTTCACAATGCTGAATCACAAGTCATATTCCGCGATTTCAAGGCTTCTAATATCCTACTTGATGCTGATTTCAATGCTAAACTCTCAGATTTCGGTTTAGCTAAAGAGGGTCCTTCTGGGGATAAGACTCATGTGTCTACTCAAGTGGTGGGCACTCTTGGATATGCAGCTCCTGAATATGTTTCCACAGGTAGGTTAACAGCCAAAAGTGACGTATATAGCTTTGGAGTGGTGTTACTAGAACTCATGACCGGAAGACAAGCTTATGACGAATCGAGAGGAGTTGTGGAACAGAACTTAGTACAATGGGCAAAACCTTATCTGAGTGACAAACGAAAATTGTATCGAATCATGGACACCAAATTAGGTGGACGATATCCATTACATGCAGCCTGCATGGTAGCCGATTTGGCTCTTCAGTGTCTTAATGATGAAGACAAGGCTAGGCCTTCTATGACTGAGGTTTTAGCTACATTGGAACAAATCAACGAAACCCTTAGAAACAATAATTGTAATAGTAACGTTGCTCGATGA 1167 0.431 MGNCLLPVEMKNNLDQHTGTSNSGGISKAGTSSSSPAASSSILHVQSYRSKGGTPLSIVLPTPTPTTEGEILSSPNLRAFSFNELKNATKNFSNENYVGEGGFGIVYKGWIDLRNCTASKPGSGRVVAVKKLKPQVFQGHKQWLTEVKYLGRLHHRNLVTLIGYCLEGENRLLVYQFLPKGSLENHLLKSQPLQWSVRIKVAIEAARGLSFLHNAESQVIFRDFKASNILLDADFNAKLSDFGLAKEGPSGDKTHVSTQVVGTLGYAAPEYVSTGRLTAKSDVYSFGVVLLELMTGRQAYDESRGVVEQNLVQWAKPYLSDKRKLYRIMDTKLGGRYPLHAACMVADLALQCLNDEDKARPSMTEVLATLEQINETLRNNNCNSNVAR 388
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco11g0799 388 Gene3D Transferase(Phosphotransferase) domain 1 178 387 - -
Acco11g0799 388 FunFam Serine/threonine-protein kinase BIK1 61 177 - -
Acco11g0799 388 FunFam Serine/threonine-protein kinase PBS1 178 387 - -
Acco11g0799 388 ProSiteProfiles Protein kinase domain profile. 92 377 IPR000719 GO:0004672|GO:0005524|GO:0006468
Acco11g0799 388 MobiDBLite consensus disorder prediction 14 37 - -
Acco11g0799 388 CDD STKc_IRAK 98 373 - -
Acco11g0799 388 ProSitePatterns Protein kinases ATP-binding region signature. 98 131 IPR017441 GO:0005524
Acco11g0799 388 Gene3D Phosphorylase Kinase; domain 1 64 177 - -
Acco11g0799 388 PANTHER OS01G0588500 PROTEIN-RELATED 41 374 - -
Acco11g0799 388 Pfam Protein tyrosine and serine/threonine kinase 95 369 IPR001245 GO:0004672|GO:0006468
Acco11g0799 388 SUPERFAMILY Protein kinase-like (PK-like) 68 373 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco11g0799 Acco-ChrAcco11 16857768 16861715 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco11g0799 68 370 Glycoside Hydrolase AT3G07070 50.325 7.88e-101 303
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-VIIa-2 Acco11g0799 PK_Tyr_Ser-Thr 2.4e-47 CL0016