Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco11g0798 ATGGAAAATATGAAGCAGAGGCAGCATCAGCAATACAAGGAAGAATCCAAGAAGAAGGAGCGTCACATTGTCTCTTGGAGTCAAGAGGAGGATGATATACTTAGAGAGCAGATTAGCATTCATGGAACAGACAATTGGACAATTATTGCATCTAAATTCAAGGATAAAACGACAAGACAATGCAGGAGGAGGTGGTACACATACTTGAATTCTGATTTCAAGAAAGGAGGGTGGTCACCAGAGGAAGATATGCTATTATGTGAGGCTCAGAAGATTTTTGGCAACCGATGGACAGAAATAGCCAAGGTGGTTTCAGGCAGAACGGATAATGCTGTGAAAAATCGGTTCACCACACTTTGCAAAAAGAGAGCAAAATATGAAGCCTTGGCCAAAGAGAACAACCCTTCATTCATCAATTCAAATAACAAAAGGATCATTTTCCAACAAGTTTACAGTGAAAATGCACTGTCAGAGGTTGCAGCATCCATTAAGAAGATGAGGGCCCACATCCCTGATGCTGCAGCAAGGATCACCTATGGAGACAGACCACACAAACAATTTGGAACACCAGTTAGTCAGCAACCTAGAGTGCCATTTGCAGTATTATCTAATTTCAATGATAACAGCTTGCTAGATCGACATCCTATCTGCAGTGCCAAGTTCAATAGTTGCGCCCAAAACAACAAGACTCAAGGAACATTCCTCAAAAAGGATGATCCAAAGATCAGTGTGTTGATGCAGCAAGCAGAATTATTAAGCTCGCTTGCAGTGAAAGTTAATACAGAGAACGTGGACCAGAGTCTTGAGAATGCATGGAAGGTTCTGCAAGATTTTCTGAACCAAACAAACAAATCAGATCTTTCAAGACATAAGATCACAGATTTACAGCTTGAAAATCTCAAAAATATGGCGGAGGACATAAAGAGTGGTCATGAGGGGAGCCAACCATTTACAAGGCAACCAGAGCTATATGATGACTCTCCAAGCAGCTCTGAATATAGCACAGGATCAACTATACTGGGCCATTCAGCTGATGATGATTTGGAACATTCACTGCATCAAAATGTTGGAACCGAAGGGAAGCGTACAGAAATTGAGGGACAAAAAGGAATTAGTAGTTGTGAGAAACAAGTTCTTTGTGCTTCAACTGCAGATCAAGATATCTTGCCATCTTGTGAGGAACAGATAAACAACGATTTCATCATTTCTGCCTTGTCAAGTGCAGAGTTCAGTTCCCCTATTCAGGTTACCCCTCTGTTCAGGTCCTTGGCTGCAGGAATTCCCAGCCCCCAGTTTTCAGAAAGTGAAAGGAATTTTCTGATGAAGACACTGGGAATGGAATCCCCATCTCAGAATCAAAGTGCAAAATCCTCACAACCGCCACCCTGCAAAAGAGCCTTACTACAAAGTCTATAA 1416 0.4181 MENMKQRQHQQYKEESKKKERHIVSWSQEEDDILREQISIHGTDNWTIIASKFKDKTTRQCRRRWYTYLNSDFKKGGWSPEEDMLLCEAQKIFGNRWTEIAKVVSGRTDNAVKNRFTTLCKKRAKYEALAKENNPSFINSNNKRIIFQQVYSENALSEVAASIKKMRAHIPDAAARITYGDRPHKQFGTPVSQQPRVPFAVLSNFNDNSLLDRHPICSAKFNSCAQNNKTQGTFLKKDDPKISVLMQQAELLSSLAVKVNTENVDQSLENAWKVLQDFLNQTNKSDLSRHKITDLQLENLKNMAEDIKSGHEGSQPFTRQPELYDDSPSSSEYSTGSTILGHSADDDLEHSLHQNVGTEGKRTEIEGQKGISSCEKQVLCASTADQDILPSCEEQINNDFIISALSSAEFSSPIQVTPLFRSLAAGIPSPQFSESERNFLMKTLGMESPSQNQSAKSSQPPPCKRALLQSL 471
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco11g0798 471 CDD SANT 78 119 IPR001005 -
Acco11g0798 471 ProSiteProfiles Myb-like domain profile. 25 69 IPR001005 -
Acco11g0798 471 FunFam Transcription factor MYB124 18 74 - -
Acco11g0798 471 CDD SANT 25 69 IPR001005 -
Acco11g0798 471 PANTHER MYB PROTEIN-RELATED 25 262 - -
Acco11g0798 471 Pfam Myb-like DNA-binding domain 26 86 - -
Acco11g0798 471 SMART sant 22 71 IPR001005 -
Acco11g0798 471 SMART sant 74 122 IPR001005 -
Acco11g0798 471 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 74 124 IPR017930 -
Acco11g0798 471 ProSiteProfiles Myb-like domain profile. 70 120 IPR001005 -
Acco11g0798 471 FunFam Transcription factor MYB124 77 145 - -
Acco11g0798 471 Gene3D - 11 74 - -
Acco11g0798 471 SUPERFAMILY Homeodomain-like 23 116 IPR009057 -
Acco11g0798 471 Gene3D - 76 146 - -
Acco11g0798 471 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 18 73 IPR017930 -
Acco11g0798 471 MobiDBLite consensus disorder prediction 1 23 - -
Acco11g0798 471 MobiDBLite consensus disorder prediction 313 341 - -
Acco11g0798 471 MobiDBLite consensus disorder prediction 308 345 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco11g0798 Acco-ChrAcco11 16778300 16783147 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco11g0798 64 471 MYB Transcription Factor Family AT1G14350 50.939 1.17e-126 372
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Acco11g0798 Myb_DNA-bind_6 3.7e-15 CL0123
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Acco11g0798 11 16778300 16783147 Acco11g0798 11 16778300 16783147 ECH