Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco11g0775 ATGTGGGACTTCTGGACCAAGTGTTGCATTTATCTGGTGTGTATTTCTGCAATTTCTGGGGCTTTTAGTCAGGAACCCGAACTCGGATCTACCCGTGTTGTCTTTCAGACGAATTACGGGGATATTGAATTCGGCTTCTTTCCCACTGTTGCGCCCAAAACCGTTGATCACATTTTTAAACTTATACGACTTGGATGCTATAACACAAATCATTTTTTCCGGGTTGATAAGGGCTTTGTGGCCCAAGTAGCGGATGTTATGGGTGGAAGATCCGCTCCCATGAATGAAGAACAAAAAAGGGAAGCTAAAAAGACTGTTGTTGGTGAATTTAGCCAAGTCAAACATGTTAGGGGCATTCTTTCTATGGGAAGGTATGATGATCCAGACAGTGGTGGATCCTCATTTTCAATGCTTCTAGGAGATGCCCCTCATCTTGACAGCCAGTATGCAATATTTGGAAAAGTCACTAAAGGTGATGATACGTTGAGAAAGCTTGAGGAACTACCTACTCGTAAAGAGGGGATATTTGTTATGCCAATGGAGCGTATTACTATTCTGTCATCCTATTACTACGACACTGAGAGAGAAGATTGCGAGCAAGACAGATCGATTTTGAAGCGCAGGCTAGCTGCTTCAGTTGTTGAAATCGAAAGACAGAGGATGAAATGCTTCCCCTGA 678 0.4307 MWDFWTKCCIYLVCISAISGAFSQEPELGSTRVVFQTNYGDIEFGFFPTVAPKTVDHIFKLIRLGCYNTNHFFRVDKGFVAQVADVMGGRSAPMNEEQKREAKKTVVGEFSQVKHVRGILSMGRYDDPDSGGSSFSMLLGDAPHLDSQYAIFGKVTKGDDTLRKLEELPTRKEGIFVMPMERITILSSYYYDTEREDCEQDRSILKRRLAASVVEIERQRMKCFP 225
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco11g0775 225 Pfam Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD 33 186 IPR002130 GO:0000413|GO:0003755
Acco11g0775 225 SUPERFAMILY Cyclophilin-like 32 195 IPR029000 -
Acco11g0775 225 ProSiteProfiles Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain profile. 34 190 IPR002130 GO:0000413|GO:0003755
Acco11g0775 225 Gene3D - 21 198 IPR029000 -
Acco11g0775 225 PRINTS Cyclophilin peptidyl-prolyl cis-trans isomerase signature 72 84 IPR002130 GO:0000413|GO:0003755
Acco11g0775 225 PRINTS Cyclophilin peptidyl-prolyl cis-trans isomerase signature 118 133 IPR002130 GO:0000413|GO:0003755
Acco11g0775 225 PRINTS Cyclophilin peptidyl-prolyl cis-trans isomerase signature 46 61 IPR002130 GO:0000413|GO:0003755
Acco11g0775 225 PRINTS Cyclophilin peptidyl-prolyl cis-trans isomerase signature 147 162 IPR002130 GO:0000413|GO:0003755
Acco11g0775 225 PANTHER PEPTIDYL-PROLYL CIS-TRANS ISOMERASE CYP23 6 225 IPR044233 -
Acco11g0775 225 CDD cyclophilin 34 187 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco11g0775 33 191 U-box Gene Family AT5G67530 28.743 1.21e-11 61.6
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Acco11g0775 11 15984065 15991194 Acco11g0775 11 15984065 15991194 ECH