Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco11g0768 ATGGAGTTTTTTAGTTCGATTGACATGGAGAGTCCTCCTTCCAACGATTTTTGTTCGGTGTGCCACGGAGACTACAACAATCCTTGCCAAGCCAATTGCTCTCACTGGTTTTGCGGAAGCTGTATTATGCAAGTGTGGCACCATGGATCAACTGTAAGGCCATGTCAATGCCCGTTATGTCGCCGTCAAATTACATTGCTGGTTCCAACTGAGGACTTTTTAAGGCAGCGTTATGACCCTGAAGTTGCTGAGGTTCTACGAAATATTGAAACATATAATCGTATGTTTGGTGGTCAAGCAACTGGTCTAGTTCAGAGAATGCAAGATCTTCCTTTTCTCCTACGAAGGCTACTGCGGGAGCTGATGGATCCTCACAGAACACTTCCTCTTGCCATTAAGGCTCGTTTCTACATTGCAGCGATATCAAGTGCTGTTTACATTTTAAGCCCCGTTGACATTATTCCTGAAGCGATATTAGGAATATTTGGTTTGTTGGATGATCTCCTTGTTGCTCTCATATGCTTCCTCTATATTGCTTCTGTTTATAGATCAGTGCTCTATTTCCGCCATGGGGGCTCCCGGATCTGA 588 0.4422 MEFFSSIDMESPPSNDFCSVCHGDYNNPCQANCSHWFCGSCIMQVWHHGSTVRPCQCPLCRRQITLLVPTEDFLRQRYDPEVAEVLRNIETYNRMFGGQATGLVQRMQDLPFLLRRLLRELMDPHRTLPLAIKARFYIAAISSAVYILSPVDIIPEAILGIFGLLDDLLVALICFLYIASVYRSVLYFRHGGSRI 195
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco11g0768 195 PANTHER UNCHARACTERIZED 8 190 IPR038896 GO:0061630
Acco11g0768 195 SMART ring_2 18 60 IPR001841 -
Acco11g0768 195 ProSitePatterns Zinc finger RING-type signature. 33 42 IPR017907 -
Acco11g0768 195 SUPERFAMILY RING/U-box 14 69 - -
Acco11g0768 195 CDD RING-HC_RNF113A_B 11 69 - -
Acco11g0768 195 ProSiteProfiles Zinc finger RING-type profile. 18 61 IPR001841 -
Acco11g0768 195 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 3 109 IPR013083 -
Acco11g0768 195 Pfam Protein of unknown function (DUF1232) 138 172 IPR010652 -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco11g0768 43 193 C3H Transcription Factor Family AT1G72175 72.848 7.28e-68 202