Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco11g0746 ATGGAAGAGAGAAGTGACTCTCAGAAGCTTGATGAAGTCATGCTTCCAGGTTTCAGATTTCACCCGACCGATGAGGAGCTTGTTGGGTTCTATCTCAAGAGAAAGATTCAGCAGAGGCCTCTCTCTATAGAGCTCATAAAGCAGCTTGATATCTATAAATATGACCCATGGGATCTTCCGAAGTTGGCAAGCACAGGTGAGAAAGAGTGGTATTTTTATTGTCCAAGAGACAGAAAGTACAGAAACAGTGCGAGACCTAATAGGGTAACAGGAGCTGGGTTCTGGAAAGCCACAGGTACCGATAGGCCAATATATTCCTCTGCGGGTTCAAGGTGCATTGGGTTGAAGAAATCTCTTGTCTTCTATAAAGGAAGAGCTGCCAAAGGAGTCAAAACTGACTGGATGATGCATGAGTTCAGATTACCTTCTCTGTCTGACTCTTCCTCTTCACCAAAAAAGTTCTCAGAAAGAACCATCCCTGCTAATGATTCGTGGGCAATCTGCAGAATATTCAAGAAGACAAACTCTACAGCCCAAAGAGCTCTCTCTCATTCCTGGGTCTCACCCTTACCTCATGAAATGAGCACTTCTGAGATGCTAACCAAAGGCGAAGACACTTCCAAGTTTTGTTCAGATCATAACAACATTTCGTCATTGACAAAGAAAACTGGCTTACCCAACCAGTTGTTCTGTACCAACCAAAACGACCCGTTAACCTCCACCACCACCACTTGCCCTTTAGATATTGCTTCTTACAAACCCATGCTTAACCCATTGTTGTTTTACAAACCCTTTGACCAACTACCCTTCATTTCACCAAATAACGCAGACCTTTCGTTTTCATCATCCCCTCTTGAGCCATGCAATGCTAAAGTCTCCACCATGGACATTTCCTCCATGTTACTGACCATGTCATCATCTTCTGTGCTTGGAGACTTTAGCAGTAAGTCTTCATCAGAGGCTGCAAACTTTGGAGGGTTTCAAGAACAGTACAGCTCTAATTCTGGGTATTCATCATCAATAACCTTACCAGTAATACACGACGGGAATGGACTGGTGAAGATGAATCACCCTAACACTAATCTGAATGTGAATGTGGTGATCCCTAGAGTGATGGAAGAGCCAGATCACATGAATATGCATGAAGCATGGAAGTCAAACCTGCTTTGGGATAGCTCATCTTGTCCCTGTGATCACGTGCCCTCTATTTATTCTACTACTACCAAGTGCTATACTTAG 1239 0.435 MEERSDSQKLDEVMLPGFRFHPTDEELVGFYLKRKIQQRPLSIELIKQLDIYKYDPWDLPKLASTGEKEWYFYCPRDRKYRNSARPNRVTGAGFWKATGTDRPIYSSAGSRCIGLKKSLVFYKGRAAKGVKTDWMMHEFRLPSLSDSSSSPKKFSERTIPANDSWAICRIFKKTNSTAQRALSHSWVSPLPHEMSTSEMLTKGEDTSKFCSDHNNISSLTKKTGLPNQLFCTNQNDPLTSTTTTCPLDIASYKPMLNPLLFYKPFDQLPFISPNNADLSFSSSPLEPCNAKVSTMDISSMLLTMSSSSVLGDFSSKSSSEAANFGGFQEQYSSNSGYSSSITLPVIHDGNGLVKMNHPNTNLNVNVVIPRVMEEPDHMNMHEAWKSNLLWDSSSCPCDHVPSIYSTTTKCYT 412
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco11g0746 412 Gene3D NAC domain 23 178 IPR036093 GO:0003677|GO:0006355
Acco11g0746 412 PANTHER PROTEIN CUP-SHAPED COTYLEDON 2-RELATED 13 244 - -
Acco11g0746 412 SUPERFAMILY NAC domain 12 173 IPR036093 GO:0003677|GO:0006355
Acco11g0746 412 ProSiteProfiles NAC domain profile. 14 173 IPR003441 GO:0003677|GO:0006355
Acco11g0746 412 FunFam NAC domain-containing protein 35 23 176 - -
Acco11g0746 412 Pfam No apical meristem (NAM) protein 16 141 IPR003441 GO:0003677|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco11g0746 Acco-ChrAcco11 15264346 15265782 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco11g0746 8 315 NAC Transcription Factor Family AT1G26870 59.688 7.49e-112 332
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Acco11g0746 NAM 4.9e-37 No_clan