Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco11g0739 ATGGCTTCTGAACCCGATGCGTTGGAGATTTCTGCAGTGTTCGAAAGAATGGTGAGGAATAGAGACCTGACTCTGTTTCTCCCCTTTATCTTTGGCTTATCAAATGCTGCTCTCAGAAGAGAGGGTGAAGACTCAGGTCAGGAGAATGAGAATGAAGAAAGTCCCCAACGCGAAAGAATTTTCCTGATCAACCCCTTCACACAGGGTATGGTGGTGATCGATGGTGCTTCGAGCCTTGAGGCCCTGCTTCGTGATTTGGGTGGTGGCAAGGGTGGGCGGCCTCCAGCTTCCAAAGAATCCATAGATGCTTTGCCAAGTGCTAAAATCGAGGAAGGTGATGAGGGAGAGTGTGTGATATGCTTGGAGGAGTGGGAAGCTGGTGGGGTAGTGAAAGAGATGCCTTGTAAGCATAAATTTCATCCCGATTGTGTAGAGAAGTGGTTGGGCATTCATGCGTCTTGTCCAGTTTGCAGGTATGAAATGCCTATTGATGAAGAAAGTGGAAAGAAGAGAGATGAAGAAGACGGGGAAGAGAGGAGGAGAAGGATTGGGAGAGAAGTTTGGGTTACTTTCTCTTTCAATGGTGAAGGGAGAAGAAGTGAAAACTCAAATCAAGCTCCTTCTGATGATTCCAATGATTCTTGA 645 0.4682 MASEPDALEISAVFERMVRNRDLTLFLPFIFGLSNAALRREGEDSGQENENEESPQRERIFLINPFTQGMVVIDGASSLEALLRDLGGGKGGRPPASKESIDALPSAKIEEGDEGECVICLEEWEAGGVVKEMPCKHKFHPDCVEKWLGIHASCPVCRYEMPIDEESGKKRDEEDGEERRRRIGREVWVTFSFNGEGRRSENSNQAPSDDSNDS 214
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco11g0739 214 ProSiteProfiles Zinc finger RING-type profile. 117 158 IPR001841 -
Acco11g0739 214 MobiDBLite consensus disorder prediction 194 214 - -
Acco11g0739 214 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 89 164 IPR013083 -
Acco11g0739 214 SUPERFAMILY RING/U-box 108 164 - -
Acco11g0739 214 PANTHER E3 UBIQUITIN-PROTEIN LIGASE PRAJA 48 162 - -
Acco11g0739 214 SMART ring_2 117 157 IPR001841 -
Acco11g0739 214 MobiDBLite consensus disorder prediction 195 214 - -
Acco11g0739 214 FunFam E3 ubiquitin-protein ligase RNF181 86 164 - -
Acco11g0739 214 Pfam Ring finger domain 116 158 IPR001841 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco11g0739 Acco-ChrAcco11 14844201 14844845 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco11g0739 1 199 C3H Transcription Factor Family AT1G26800 53.431 8.06e-67 202