Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco11g0737 ATGGATCAGCAAAATATGCAAAACCAACGCATGCATTTGGTTCTTTCACCTGATGCCAAGCCAAGGCTTAAATGGACTCCTGAGCTTCATCAACGTTTCCTTGATGCTGTTAACCAGCTTGGAGGGGCTGAGAAGGCAACCCCAAAGAGTATCATGAGGGTGATGGGGATTCCAGGACTTACTTTGTACCACCTGAAGAGCCATTTACAGAAATTAAGACTTGGGAAAAGCCCTCAACCAGAAGCCTTGTATGATGATAAACAAGATCATAGAGAAGACCAAAGCAGTGATGGTCATTGCAGCAGGGAAACCACTGTGGGGACTAAGAATCAGATGACGGAAAGCCAGCAGATTGCTCAAGCTCTTCAACTACAAATGGAAGTGCAGAGGAAGCTTTATGAACAAATTGAGGTGCAGAGACATTTGCAGCTTCGTATCGAAGCTCAAGGGAAGTACTTACAGTCAGTGCTATTAAAAGCTCAGGAAGCACTTGCAGGGTATAATCCTTCTGCTGCTGGTATAGAACATGCAAAAGCTGAGCTCTCTCAATTAGTATCAATAATTAACAATGGCTGCCCAAGTTCGCCCATCTCAGAAATGACAGAAACCGGAGTTTTGAGCTTGAACGAAGGAGGAGAAAGGAAGCAAAGCAGAGGGACCATGTGTTCATTGGAGAGTTCCTTGACATCTGCTGAAAGCTCAGGGACAAAGGAGGAGGAAGAGGTGCCTCACAAGTCTAACCGAACTTCAGTTGAACTGCAATTGATGACTGTTAGCCCAGAAGAAGATAATAAAGGATTGAATGGTGAATCAAAGACTCAAGCTTCTGGGAGAAAAAGAAGTGGAACCACTGATTCTGATGGTTGCTGTGTAGAGCAACCAATCAGTAAAAGATGCAGCAACTGGTCCACGAAACATGAGTCGCCTGAATTGCTTGATTTGAACAGTCAGTATCACAGTGACACTGACTCAGACTCAAAGACCATAATAGACTTGAATAGCAGTTCGACTCACAGTTTTATCTTTAGAACCTTAAAAACAGATGGGCTCTAG 1053 0.4387 MDQQNMQNQRMHLVLSPDAKPRLKWTPELHQRFLDAVNQLGGAEKATPKSIMRVMGIPGLTLYHLKSHLQKLRLGKSPQPEALYDDKQDHREDQSSDGHCSRETTVGTKNQMTESQQIAQALQLQMEVQRKLYEQIEVQRHLQLRIEAQGKYLQSVLLKAQEALAGYNPSAAGIEHAKAELSQLVSIINNGCPSSPISEMTETGVLSLNEGGERKQSRGTMCSLESSLTSAESSGTKEEEEVPHKSNRTSVELQLMTVSPEEDNKGLNGESKTQASGRKRSGTTDSDGCCVEQPISKRCSNWSTKHESPELLDLNSQYHSDTDSDSKTIIDLNSSSTHSFIFRTLKTDGL 350
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco11g0737 350 MobiDBLite consensus disorder prediction 210 290 - -
Acco11g0737 350 MobiDBLite consensus disorder prediction 269 290 - -
Acco11g0737 350 SUPERFAMILY Homeodomain-like 19 74 IPR009057 -
Acco11g0737 350 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 20 77 IPR017930 -
Acco11g0737 350 Coils Coil 119 139 - -
Acco11g0737 350 PANTHER MYB FAMILY TRANSCRIPTION FACTOR PHL11 3 271 IPR044848 GO:0003700
Acco11g0737 350 FunFam Myb family transcription factor 19 77 - -
Acco11g0737 350 NCBIfam myb-like DNA-binding domain, SHAQKYF class 20 75 IPR006447 GO:0003677
Acco11g0737 350 MobiDBLite consensus disorder prediction 74 111 - -
Acco11g0737 350 Pfam Myb-like DNA-binding domain 22 72 IPR001005 -
Acco11g0737 350 Pfam MYB-CC type transfactor, LHEQLE motif 117 162 IPR025756 -
Acco11g0737 350 MobiDBLite consensus disorder prediction 80 99 - -
Acco11g0737 350 Gene3D - 19 77 - -
Acco11g0737 350 MobiDBLite consensus disorder prediction 213 233 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco11g0737 Acco-ChrAcco11 14839456 14840977 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco11g0737 10 298 G2-like Transcription Factor Family AT1G69580 46.512 7.43e-76 235
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GARP-G2-like Acco11g0737 Myb_DNA-binding 1.6e-08 CL0123