Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco11g0723 ATGGAGACCAGATCAGCAAGAGGCTCTGATCTTCCCCCAGGCTTCAGATTTCACCCCACGGACGAGGAATTAATCGTCCATTACCTCTGTAACCAAGCCACCTCCAAGCCTTGCCCTGCTTCTATCATCCCTGAAGTTGATATCTACAAGTTTGATCCCTGGCAGTTACCTGAGAAGGCAGTGTTTGGAGAGAATGAGTGGTATTTCTTTACCCCAAGGGACAGGAAGTACCCAAATGGGGTGAGGCCAAACCGGGCCACTGTGTCTGGGTACTGGAAGGCCACTGGAACAGACAAGGCAATTTACAGTGCGGCCAAGCACATTGGAGTGAAGAAAGCTCTGGTTTTTTACAAAGGCAGGCCACCGAAAGGTGTCAAAACGGATTGGATCATGCATGAGTATCGTCTCATTGGTTCACCAAGACGAGCCAACAAACATATTGGATCCATGCGATTGGATGATTGGGTGCTGTGTAGAATTTACAAGAAGAAGAACATGGCAAAATCAATGGACCTACTAAAGGAGGAAATAATGATGGAGGAAGATCAATACACAAGTCCTGAAATGAACAACATAACTGAAGAAAATAATAACAAGATGCCCAATCTTGTCTCTGAGCAGCAACAAATGGTGAAATTCCCAAGGACTTGTTCTCTCACTCATCTTCTGGAAATGGAATCTTACTTGGCTCCAATCTCACACCTTTTATCTGATGCTTCCTATAACTCAACCTTTGATTATCAGATAAATACTTCCTATAATAATGCAGGGAATTTAATAATAGACCCATTTGTAAAATCTCATCAGGCCTTTGAGGTCCCAGATCAGTACTATGCAACATCATCTTCAACCAGCCAGTATCTGTGA 867 0.4371 METRSARGSDLPPGFRFHPTDEELIVHYLCNQATSKPCPASIIPEVDIYKFDPWQLPEKAVFGENEWYFFTPRDRKYPNGVRPNRATVSGYWKATGTDKAIYSAAKHIGVKKALVFYKGRPPKGVKTDWIMHEYRLIGSPRRANKHIGSMRLDDWVLCRIYKKKNMAKSMDLLKEEIMMEEDQYTSPEMNNITEENNNKMPNLVSEQQQMVKFPRTCSLTHLLEMESYLAPISHLLSDASYNSTFDYQINTSYNNAGNLIIDPFVKSHQAFEVPDQYYATSSSTSQYL 288
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco11g0723 288 FunFam NAC transcription factor 20 167 - -
Acco11g0723 288 Pfam No apical meristem (NAM) protein 12 136 IPR003441 GO:0003677|GO:0006355
Acco11g0723 288 Gene3D NAC domain 20 168 IPR036093 GO:0003677|GO:0006355
Acco11g0723 288 SUPERFAMILY NAC domain 6 163 IPR036093 GO:0003677|GO:0006355
Acco11g0723 288 PANTHER NAC TRANSCRIPTION FACTOR 56 11 202 - -
Acco11g0723 288 Coils Coil 163 183 - -
Acco11g0723 288 ProSiteProfiles NAC domain profile. 11 163 IPR003441 GO:0003677|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco11g0723 Acco-ChrAcco11 14100189 14101577 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco11g0723 9 235 NAC Transcription Factor Family AT1G69490 65.801 8.93e-110 317
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Acco11g0723 NAM 4.2e-39 No_clan