Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco11g0719 ATGGGTAGGTCACCTTGCTGTGAGAAAGTAGGGTTGAAGAAAGGACCTTGGACTCCTGAAGAAGACCAGAAGCTCATCGCCTACATTGAACAACATGGCCATGGAAGCTGGCGTGCTTTGCCTTCCAAAGCTGGACTTGAGAGATGTGGGAAAAGTTGCAGGCTGAGGTGGACTAATTATCTCAGACCTGATATTAAACGAGGAAAGTTCAGCTTGCAAGAAGAGAGAACCATTATTCAACTTCATGCTCTTCTTGGAAACAGATGGTCGGCCATAGCGGCTCACTTGCCGAAGAGAACTGACAATGAGATCAAGAACTACTGGAACACTCATCTTAAGAAGAGGCTCGCCAAAATGGGAATCGACCCGACCACACACCGGCCTAAAGTTGATGCCGGCGGACCGGCGATCTCGAGCCTTAGCCACATGGCTCAGTGGGAGAGTGCTCGGCTTGAAGCCGAAGCCAGGCTTATCAAAGAGTCCAAGCTCCAGTTTGGCTCGTCATCGTCTTTATTCCCCCCAGCTCAACCGGCTCGGCTCGTCCTCAACAGCATCTCGACTTGGCCTTCCGTACTGCCGTGCTTAGACGTGCTCAAAGCATGGCAGAACTCATGGACGTCGTTGCCGACCGTAGAAGACAAAAGTACCAGAAAGCATAGCATGTATGCCTTGATGCCCGCTGCCGCTGATGACAACCTTAGGTCGCCGACGTCCACCTTGAGCTTCCCGGAATCCATGTTACCGCCTAGCTCCACCGCCACCACAACTACCGCAGGAATATCACCCATTAGTGAAAAAATCATCATCCCTCCGGCCACCAACACTACCATGGTTAATTCTGTCCGCGCACCCACTTCAGGAAGCAAGCCATGCGATACCGAGGCGGCAGTCACTGGAGAAAGAAGAACGATGACGACAAATTTACAAGACGACAACATTATGGCGGCGGTGGAGGCATTTATGGGAGAAAGGTACAAGAACGTACAAATCAATCTACAACAAGTACTGGCGTCGAACAGTATAATGGGTGGTTTAAATAGCGAAGATAACGATGATGTGCTTGTTTTTGAATCGAATAAGAATATCGACAGCGAAGATAACGATGATATGCTTGTTTTTGAATCCCATGAGAATATGGAAAACTTGGGTTTCATGGATATTAATGGCGAAGCAACCACGATTTGTGGAAACACAAACTTTGAGGAGAAGAATCATTACTGGAACAGCATATGTAGTACCCAAACTTGGGGTTTATAA 1257 0.4837 MGRSPCCEKVGLKKGPWTPEEDQKLIAYIEQHGHGSWRALPSKAGLERCGKSCRLRWTNYLRPDIKRGKFSLQEERTIIQLHALLGNRWSAIAAHLPKRTDNEIKNYWNTHLKKRLAKMGIDPTTHRPKVDAGGPAISSLSHMAQWESARLEAEARLIKESKLQFGSSSSLFPPAQPARLVLNSISTWPSVLPCLDVLKAWQNSWTSLPTVEDKSTRKHSMYALMPAAADDNLRSPTSTLSFPESMLPPSSTATTTTAGISPISEKIIIPPATNTTMVNSVRAPTSGSKPCDTEAAVTGERRTMTTNLQDDNIMAAVEAFMGERYKNVQINLQQVLASNSIMGGLNSEDNDDVLVFESNKNIDSEDNDDMLVFESHENMENLGFMDINGEATTICGNTNFEEKNHYWNSICSTQTWGL 418
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco11g0719 418 CDD SANT 69 112 IPR001005 -
Acco11g0719 418 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 9 61 IPR017930 -
Acco11g0719 418 CDD SANT 16 61 IPR001005 -
Acco11g0719 418 ProSiteProfiles Myb-like domain profile. 62 112 IPR001005 -
Acco11g0719 418 FunFam MYB-related transcription factor 13 66 - -
Acco11g0719 418 Gene3D - 69 116 - -
Acco11g0719 418 FunFam MYB transcription factor 69 116 - -
Acco11g0719 418 ProSiteProfiles Myb-like domain profile. 9 61 IPR001005 -
Acco11g0719 418 PANTHER MYB FAMILY TRANSCRIPTION FACTOR 1 240 - -
Acco11g0719 418 MobiDBLite consensus disorder prediction 233 257 - -
Acco11g0719 418 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 62 116 IPR017930 -
Acco11g0719 418 SUPERFAMILY Homeodomain-like 11 108 IPR009057 -
Acco11g0719 418 Gene3D - 11 67 - -
Acco11g0719 418 SMART sant 66 114 IPR001005 -
Acco11g0719 418 SMART sant 13 63 IPR001005 -
Acco11g0719 418 Pfam Myb-like DNA-binding domain 67 112 IPR001005 -
Acco11g0719 418 Pfam Myb-like DNA-binding domain 14 61 IPR001005 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco11g0719 Acco-ChrAcco11 13936728 13938962 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco11g0719 1 249 MYB Transcription Factor Family AT3G01140 59.073 1.87e-99 298
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Acco11g0719 Myb_DNA-binding 2.4e-15 CL0123