Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco11g0698 ATGGGTTACCCCATTCACCCTCTTCTTCAGCACCAAAGGATATCTGAGGTCCAGGCTCTAGAAAAGTTTGTATTGGTTCGTATGTTTCTGGCTTTGTTTGCTTTACGCCCTATTGACATTTTTCCATTTGTAGTAGGTCAACAATCACAGAATCCCCTCTTGTTGCTTGGGCAATATAGTGATGAAGAAGTGGATGAGGAATCAAGTAAAGGGGATAATGAGGCTAAAGATCAGAGCTCCGTGTTGAGTGAAGAGACCGATGGTCCACAGGGAACATCTCAAAATCCTATTTCTTTGGATGTTGGTGATTGTGATAAAATGGAAGTTGGTTTGCGAAAAGGAATTGTCTCGAAAGACCACACTTCAGTTTCTGAAATTACCAATGAACAAGTTATTGCTGATGTTGATCTGGGGTGGAAGATGGTAATGCATGAGGAGAGCAAACGCTATTATTACTGGAATGGTGAAACTGGAGAAACTTCCTGGGAGTGCGCTGCTGGTGTAGATAATTCCAAAATCTCCTCTGCTACAGTGCATGATTCTTTAGCTGCTCTAGCACCTGATGGTTCTTTAAGGACTACGGTGTTTTCTAATGGAGGAACTTACAGTCATGGGTCCCAGGCTAATGGATGGGATGAAGAATATAGGGATGATGGTCTTTCTAAGGTTGCCCTAACTATTATTTTTGTCCATGAGGTTGACAGCATGCCCGGTCAGCGCACTAGAGTTGGAGAACATGAGGCTATGAGGAAGATTAAAAATGAATTCATGATGCACTGGGATGGTCTAGTGACAAAACCCACGGAGCAAATTCTTGTCCTTGCTGCAACAAACAGGCCATTTTACCTTGATGAAGCAATCATACGAAGAATCATAGTCGGTCTTCCATCTGTTGAGAATAGGGAAATTATCTTGAAGACTCTACTAGCTAAGGAAAAGACTGCAAATTTCGACTTAAAAGGGCTTGTTGTCATGACAGAAGGATACGGTGGAAGTGATCTTAAGCCTTAA 1011 0.4224 MGYPIHPLLQHQRISEVQALEKFVLVRMFLALFALRPIDIFPFVVGQQSQNPLLLLGQYSDEEVDEESSKGDNEAKDQSSVLSEETDGPQGTSQNPISLDVGDCDKMEVGLRKGIVSKDHTSVSEITNEQVIADVDLGWKMVMHEESKRYYYWNGETGETSWECAAGVDNSKISSATVHDSLAALAPDGSLRTTVFSNGGTYSHGSQANGWDEEYRDDGLSKVALTIIFVHEVDSMPGQRTRVGEHEAMRKIKNEFMMHWDGLVTKPTEQILVLAATNRPFYLDEAIIRRIIVGLPSVENREIILKTLLAKEKTANFDLKGLVVMTEGYGGSDLKP 336
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco11g0698 336 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 216 334 IPR027417 -
Acco11g0698 336 PANTHER AAA ATPASE, PUTATIVE (AFU_ORTHOLOGUE AFUA_2G12920)-RELATED-RELATED 221 335 - -
Acco11g0698 336 MobiDBLite consensus disorder prediction 82 99 - -
Acco11g0698 336 MobiDBLite consensus disorder prediction 61 102 - -
Acco11g0698 336 ProSiteProfiles WW/rsp5/WWP domain profile. 133 163 IPR001202 GO:0005515
Acco11g0698 336 SMART ww_5 134 167 IPR001202 GO:0005515
Acco11g0698 336 Gene3D - 296 335 - -
Acco11g0698 336 Gene3D - 223 295 IPR027417 -
Acco11g0698 336 Pfam WW domain 138 163 IPR001202 GO:0005515
Acco11g0698 336 SUPERFAMILY WW domain 129 163 IPR036020 GO:0005515
Acco11g0698 336 ProSitePatterns AAA-protein family signature. 271 290 IPR003960 GO:0005524|GO:0016887
Acco11g0698 336 CDD WW 138 163 IPR001202 GO:0005515
Acco11g0698 336 Pfam ATPase family associated with various cellular activities (AAA) 225 291 IPR003959 GO:0005524|GO:0016887
Acco11g0698 336 Gene3D - 132 174 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco11g0698 Acco-ChrAcco11 11741364 11743921 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco11g0698 224 334 Calmodulin-binding Proteins AT3G56690 33.613 4.19e-09 56.2