Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco11g0695 ATGAAGAAACACTGTCAAGGAGAGAATAATATTGAGTGGCAAGAAGCAGCAGCCATGGCAGCAAGTCTTCTAAAAGCTCGAAGAACAGGAAGAAAGAGGTTCATTGGGGTTCGTCAGAGACCTTCAGGGAGATGGGTCGCTGAAATAAAAGACACAATTCAGAACATAAGAGTTTGGTTAGGGACTTATGATACTGCAGAAGAAGCTGCAAGAGCTTATGATGAAGCTGCTTGCTTGCTTCGTGGAGCTAATACTCGGAGAAACTTCTGGCCTTCTCACTATAATTCTAACTACCCAGTAAATAATCCAGTTCTTCCCAGAAAGATTGCTAATCTCATCCTTCTTCGGCTCAAAGCTCGAAACATTGCTTCTTCTTCTCATCATTTTCCCAGTAACCAAACAAAAGAAGAAGAAGAAGAAAAGCCAAAGACCGAGCTTGATCATTTTCTTGATGGGTTTGATGGTGGTGAATTTTGTAGTAGTGAGTTTTCTTGTGATTTTCCCAGTGACAGCCAAACAGGTTTAGAAGAACCCTACCAGTTGAACAGCTTTCTAGAAGAGTCAGACAATAGTTTTCTCACAGATTTAGTCAGTTTTAGATCAGGAAACAAAACTAACTTGTTGGATGAAGAAGTAGGATTTAATGAAGAAAATCATGGGAAGGAGAAGAAGATGGATGGGGAAAAGATTGAAAGTGAGAGGGAAAAAGAAATTTTTGAGGAATATTCTGATATGGGGTTCATGGATTTTCAGTTTTTGAATAACTTGGGATCTATTTGTGATTCTTCTCCATTTGAGGTAGCAGAAGAGATGATGGGGCCAATTATAATGGATCAGAAACATAAAGAAGTATATGAAAATGATGATGAAGCATCATTTTTAATAGAAAGTTTTAGGATGAAATATGAACGGAAATTCTCAGCTTGTCTTTATACCTACTGTGGAGTTTCCGAGTGCCTGAGGCTACAATTTGGATCAGAAAATTTCTGA 990 0.3838 MKKHCQGENNIEWQEAAAMAASLLKARRTGRKRFIGVRQRPSGRWVAEIKDTIQNIRVWLGTYDTAEEAARAYDEAACLLRGANTRRNFWPSHYNSNYPVNNPVLPRKIANLILLRLKARNIASSSHHFPSNQTKEEEEEKPKTELDHFLDGFDGGEFCSSEFSCDFPSDSQTGLEEPYQLNSFLEESDNSFLTDLVSFRSGNKTNLLDEEVGFNEENHGKEKKMDGEKIESEREKEIFEEYSDMGFMDFQFLNNLGSICDSSPFEVAEEMMGPIIMDQKHKEVYENDDEASFLIESFRMKYERKFSACLYTYCGVSECLRLQFGSENF 329
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco11g0695 329 Gene3D AP2/ERF domain 32 90 IPR036955 GO:0003700|GO:0006355
Acco11g0695 329 SUPERFAMILY DNA-binding domain 33 91 IPR016177 GO:0003677
Acco11g0695 329 ProSiteProfiles AP2/ERF domain profile. 33 90 IPR001471 GO:0003700|GO:0006355
Acco11g0695 329 Pfam AP2 domain 33 82 IPR001471 GO:0003700|GO:0006355
Acco11g0695 329 PANTHER SHN SHINE , DNA BINDING / TRANSCRIPTION FACTOR 29 222 - -
Acco11g0695 329 CDD AP2 32 89 IPR001471 GO:0003700|GO:0006355
Acco11g0695 329 PRINTS Ethylene responsive element binding protein signature 56 72 IPR001471 GO:0003700|GO:0006355
Acco11g0695 329 PRINTS Ethylene responsive element binding protein signature 34 45 IPR001471 GO:0003700|GO:0006355
Acco11g0695 329 SMART rav1_2 33 96 IPR001471 GO:0003700|GO:0006355
Acco11g0695 329 FunFam ethylene-responsive transcription factor RAP2-11 32 91 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco11g0695 Acco-ChrAcco11 11514905 11515894 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco11g0695 31 113 AP2-EREBP Transcription Factor Family AT5G19790 66.265 1.12e-30 115
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-ERF Acco11g0695 AP2 4e-15 CL0081