Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco11g0694 ATGGAAGAGACAGACAACAAGTCCAATGCTAACAAGAAGTTTATGACAAAAAGAAGAAGCTTCAGAGGCGGAGCCAACAACGCTCATGAACATCATTATCATCATCACTATCATCATCTTCATCATCAGCATCAGCATCAGCTTCTGCTAAAACAATACTCGACTCAGTTTGGGTTATGTTACCAGAACGAGTATCAGAGGTACTACCCAGCTCTTCTTCCTCCACCTTCTGTTCTACCTCTGCAGCTAGCTTTGACGACGCCGTCGTTCGCTCAAAACCAGACCTTCAAATCGAAAACCCATTCACAGAAGTCTCCATGCAAGCTCAATAATTCTCCCTTTGCTGCATCGTCATATAACAAAGTCTCAGTAGACACAGTTTCTTATGCTCCCAAGGAGTCTCATCAGCAAGTCAAGGCGTCCCTTGAAGGAGATGATGAAAAGAAACTCATTCCTGCAAGAATACCACAGCCACTAGTTGCCGCAAGGAGGCCAGATTCCGGTGGCAAAGAAGGCTCTATGATCTCTCTCCTTGCCAACCACTTTCTAGTCAAGTTTGATTCATCACAAAAAATATACCATTACAATGTTGAAATCACTCCCAATCCATCCAAGCAAGTTGCCCGAGTAATCAAAGAGAAGTTCGTTAATAATAATTCTGCTGTGCTTTCTGGTGCTCATCCAGCATATGATGGGCATAAGAATATTTATAGCTCTGTTGAATTCCAAAATGACAAGCTTGAGTTCTACGTAAGCCTGCCAATCCCTGTGAGCAAGAGCTCATTACCTGATAGAGAAATGTGTGACTTGAAAGAGAGGTATGACCAGCTTAAACTGTTCAGAATAAATATAAAACTAGTCTCTAAGATCAATGGGAAGGAGTTGGCAAAATACTTGAGCAAAGAGGAAGATGATTGGATTCCACTTCCACAGGATTATCTCCATGCTTTGGATGTAGTTCTGAGGGAGAGTCCAACTGAGAATTGTATACCTGCTGGTAGGTCTTTCTATTCGACTTCAATGGGAAGAACCAAAGAGATTGGAGGAGGAGCTTCTGGGTTGAGAGGGTTCTTTCAGAGTCTTAGACCAACTCAACAAGGACTTGCCCTTAATGTTGATTTTTCTGTAACTGCTTTCCATGAAAGCATAGGAGTGATTCCATACTTGCAGAAGCGTCTCGAGTTCCTTCGAGATCTTTCTCAAAGGAAGACGACAAGTTTAACAGGTGAAGAGAGGAAAGGAGTGGAGAAGGCATTGAAGAACATCAGAGTCTTTGTTTGTCATAGAGAAACTGTTCAGAGATATCGCGTCTATGGCTTAACTGAGGAGACTACTGAAAATCTTTGGTTTACTGACAGGGATGGAAAGAATCTGAGGCTTGTGAATTATTTTAAAGATCACTATAACTATGACATACAATTTAGTAAATTGCCATGCTTGCAAATTAGTAGGAGTAAACCATGTTATCTTCCTATGGAGCTTTGTGTCATCTGTGAAGGCCAGAAGTTCCTTGGAAAGCTTTCAGATGATCAAACTGCAAAAATACTCAAGATGGGATGCCAAAGACCAAGAGAACGAAAAGCCATCATTGAAGGAGTCATGAGGGGGCCTGTGGGGCCAACTAGTGGCAACCAGGAAAGGGAATTCAACCTCCACGTATCAAGAGAAATGACTCGTTTATCTGGGAGAATTCTCCATCCTCCCAAGCTAAAACTTGGGAATGGAGGTCATGTGACGAAGCTAGTTCCTTCACGGCATGACCGCCAGTGGAACCTTCTGGATGGTCATGTCTTTGAGGGAACTAGAATTGATAGGTGGGCATTAATAGGCTTTGGTGGTACACCTGAACAGAAATCCAATGTCCCGGGATTTATAAGCCAGCTATCTCAAAGGTGTGAAGAAATGGGTATTTTTCTTAACAAGAACACAATTGTTAGCCCCCATTTTGAACCAGCCCAGGTTCTTAATAATGTCTCTCTTCTGGAATCCAAGCTCGAAAAAATCCAGAGAACCGCCTCAAACAATCTACAGCTGCTTATTTGTGTTATGGAGAGGAAACACAAAGGGTATGCAGACTTGAAAAGAATTGCAGAGACAAGTATTGGGGTTGTGAGCCAATGCTGCTTGTATCCAAATCTCAGCAAATTAAGTTCACAATTTTTGGCAAATTTGGCTCTCAAAATCAATGCCAAAGTTGGTGGATGCACTGTTGCCCTGTACAATTCACTTCCTTCTCAAATTCCACGGCTCTTCAAGTATGATGAACCAGCTATATTTATGGGTGCTGATGTAACTCATCCTCATCCACTTGATGATCATAGTCCATCAGTTGCTGCGGTTGTCGGCAGCATGAATTGGCCTACTGCGAACAAATATATTTCAAGAATAAGGTCGCAAACACACCGTCAAGAAATCATCCAGGATCTTGGTGCAATGGTGAAGGAGTTACTAGATGATTTCCATCAGGAGGTAAAGAAACTCCCTGGGAGAATAATTTTCTTTAGAGATGGGGTTAGTGAAACCCAATTCTATAAAGTTCTTCAAGATGAGTTACAATCCATCAAAGGGGCATGTTCTAGATTTCCTGGTTATAAACCATTCATTACTTTTGTAGTAGTACAAAAGAGGCATCACACAAGGCTGTTCCCCTTCGAAACTGATGATCAGTCATCCACAAAAAATCATAATCATTGTTGTGAGAATATTCCACCGGGGACTGTGGTTGATTCCGTGATAACTCACCCGAAGGAGTTTGATTTCTATCTTTGCAGCCACTGGGGCATGAAAGGAACCAGCAGGCCAACTCATTACCATGTTTTGTGGGATGAAAACCAGTTTACTTCTGATGAACTCCAGAAACTGGTCTACAACCTATGCTATACTTTTGTTAGATGCACAAAGCCAATTTCTTTGGTTCCTCCTGCTTATTATGCCCATTTAGCTGCATACAGAGGCAGACTCTACCTTGATAGGTCAGAATTTTCCTCTGGTTTGTCTAAAGGCATCTCTTTATTGTCTAGACCTGCACCTCCAAAGACAACACCTCTTCCAAAACTTAGTGAGAACATCAAGAAGCTCATGTTCTACTGCTAA 3093 0.42 MEETDNKSNANKKFMTKRRSFRGGANNAHEHHYHHHYHHLHHQHQHQLLLKQYSTQFGLCYQNEYQRYYPALLPPPSVLPLQLALTTPSFAQNQTFKSKTHSQKSPCKLNNSPFAASSYNKVSVDTVSYAPKESHQQVKASLEGDDEKKLIPARIPQPLVAARRPDSGGKEGSMISLLANHFLVKFDSSQKIYHYNVEITPNPSKQVARVIKEKFVNNNSAVLSGAHPAYDGHKNIYSSVEFQNDKLEFYVSLPIPVSKSSLPDREMCDLKERYDQLKLFRINIKLVSKINGKELAKYLSKEEDDWIPLPQDYLHALDVVLRESPTENCIPAGRSFYSTSMGRTKEIGGGASGLRGFFQSLRPTQQGLALNVDFSVTAFHESIGVIPYLQKRLEFLRDLSQRKTTSLTGEERKGVEKALKNIRVFVCHRETVQRYRVYGLTEETTENLWFTDRDGKNLRLVNYFKDHYNYDIQFSKLPCLQISRSKPCYLPMELCVICEGQKFLGKLSDDQTAKILKMGCQRPRERKAIIEGVMRGPVGPTSGNQEREFNLHVSREMTRLSGRILHPPKLKLGNGGHVTKLVPSRHDRQWNLLDGHVFEGTRIDRWALIGFGGTPEQKSNVPGFISQLSQRCEEMGIFLNKNTIVSPHFEPAQVLNNVSLLESKLEKIQRTASNNLQLLICVMERKHKGYADLKRIAETSIGVVSQCCLYPNLSKLSSQFLANLALKINAKVGGCTVALYNSLPSQIPRLFKYDEPAIFMGADVTHPHPLDDHSPSVAAVVGSMNWPTANKYISRIRSQTHRQEIIQDLGAMVKELLDDFHQEVKKLPGRIIFFRDGVSETQFYKVLQDELQSIKGACSRFPGYKPFITFVVVQKRHHTRLFPFETDDQSSTKNHNHCCENIPPGTVVDSVITHPKEFDFYLCSHWGMKGTSRPTHYHVLWDENQFTSDELQKLVYNLCYTFVRCTKPISLVPPAYYAHLAAYRGRLYLDRSEFSSGLSKGISLLSRPAPPKTTPLPKLSENIKKLMFYC 1030
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco11g0694 1030 Pfam Piwi domain 679 986 IPR003165 GO:0003676
Acco11g0694 1030 Gene3D - 750 1030 IPR036397 GO:0003676
Acco11g0694 1030 Pfam Argonaute linker 1 domain 332 380 IPR014811 -
Acco11g0694 1030 ProSiteProfiles Piwi domain profile. 678 990 IPR003165 GO:0003676
Acco11g0694 1030 SMART Piwi_a_2 678 990 IPR003165 GO:0003676
Acco11g0694 1030 Gene3D - 564 740 - -
Acco11g0694 1030 SMART DUF1785_2 330 382 IPR014811 -
Acco11g0694 1030 Gene3D paz domain 376 503 - -
Acco11g0694 1030 SUPERFAMILY PAZ domain 377 535 IPR036085 GO:0005515
Acco11g0694 1030 FunFam Argonaute 10 564 740 - -
Acco11g0694 1030 FunFam protein argonaute 10-like 747 1030 - -
Acco11g0694 1030 Pfam PAZ domain 393 515 IPR003100 GO:0005515
Acco11g0694 1030 SUPERFAMILY Ribonuclease H-like 663 990 IPR012337 -
Acco11g0694 1030 CDD PAZ_argonaute_like 393 498 - -
Acco11g0694 1030 SMART PAZ_2_a_3 390 530 IPR003100 GO:0005515
Acco11g0694 1030 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR 2C 149 991 - -
Acco11g0694 1030 FunFam Protein argonaute 7 377 503 - -
Acco11g0694 1030 Pfam N-terminal domain of argonaute 175 321 IPR032474 -
Acco11g0694 1030 ProSiteProfiles PAZ domain profile. 390 499 IPR003100 GO:0005515
Acco11g0694 1030 CDD Piwi_ago-like 547 989 IPR045246 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco11g0694 Acco-ChrAcco11 11476713 11480438 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco11g0694 86 1030 Eukaryotic Initiation Factors Gene Family AT1G48410 39.596 0.0 637