Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco11g0584 ATGGAGAGCCACAGTAACAGTACTGAATACCGGTGGAGAGCTGAAGAAGCCATTGGTGGCAACGCCAAAGCTCTTCAAGCTCTCAGAGAACTCGTCATATTCCCGCTTCTCTACTCTCGCCAGGCTAAGAAGCTCGGCATCAAATGGCCGCAGGGATTGCTGCTGTACGGTCCTCCAGGCACTGGAAAGACAAGTCTAGTACGAGCAGTTGTTCAGGAATGTGGAGCACATATGACAATGATCAGTCCTCATTCTGTCCATAAAGCGCATGCTGGGGAAAGTGAGAGAATTCTCCGTGAGGCCTTTGCAGAGGCATCATCTCATTCAACTTGTGGCAAGCCGTCTGTTATCTTTATAGATGAAATAGATGTACTCTGTCCACGGCGAGATTCCAGAAGGGAGCAAGATGTTCGAATTGCTTCCCAGCTCTTCACATTGATGGATTCAAATAAACCATCCTCATCTATGCCAAGAATTGTTGTGGTTGCAGCAACTAACAGAATAAATGCAATTGACCCAGCCCTTAGAAGGTATGGACGTTTTGATGCTGAAATCGAAGTTACTGCCCCAACTGAAGAGGAGCGTTTTCAAATTCTTAAGCTTTACACAAAGAAAATTCCCTTGGATCCCAGTGTTGACTTAAAAATGATAGCTGCATCTTGCAATGGATATGTCGGGGCTGATTTGGAAGCCTTGTGCCGTGAGGCTACTACATTAGCAGCTAAAAGGTTCAGAGATGCAAATGGAAATGTTAATCACTTAACCACAATTATGGAAGATTGGAACAATGCAAGATCTGTTGTTGGTCCCAGCATTACGAGAGGTGTTACAGTGGAAATTCCCAAAGTGACTTGGGATGATATTGGGGGATTAAAAGAATTAAAGAAAAAGCTTCAGCAAGCTGTTGAATGGCCTATCAAGCATTCTGAAGTATTTTCAAGAATGGGCATTTCCCCTGTAAGAGGGATTCTCTTGCATGGGCCTCCAGGATGTTCCAAAACAACTCTTGCCAAAGCTGCTGCACATGCTGCCCAATCTTCTTTCTTTTCCTTGAGTGGTGCAGAAATGTATTCGATGTATGTTGGAGAGGGGGAAGAATTGCTTCGGAACACATTTCATAGAGCACGACTTGCAGCACCCAGCATAATATTTTTTGATGAGGCTGATGTGGTAGCCACTAAACGAGGTGATTCTTCGAGCAATAGCAGTACGGTTGGAGAGAGGCTTTTATCTACTCTTCTGACTGAGATGGATGGTTTAGAAGAGGCTACAGGAATTCTTGTCTTGGCAGCTACAAATCGCCCGTATGCAATAGATGCTGCACTAATGCGCCCTGGACGTTTTGATCTGGTGCTGTATGTGCCTCCACCTGATTCGGAAGCTCGATATGAAATACTTAGTGTACATACACGTGGCATGAAGCTAGGGAATGATGTCGATCTCAGAAGACTAGCAGAAGATACCGAGCGATTCACAGGTGCCGAACTCGAGGGTTTATGCAAGGAAGCTGGAATTGTTGCTCTAAGAGAAGACATATCTGCTACTGTTGTGTGTAATCGCCATTTCCAGGTTGTGAGAAATTCTGTGAATCCAGCACTAACAAAAGAAGAAATTGATTCTTACTCATCTTTCATGAAGACCTCATCTTCAGCATTTTCTAGGCATTTAGAACCAAGTTTAAAACTTGATAGAAAGAAAAGTAGTAGTCACATTTTAGGCTCCATTGTTAAACTTGGTATTATCAGTTGTATACTACTTGCTGCTACTAAATACTTTTTCATGCATGAAGAACAATCTGTATCTGAAGTAGCTGTCACATGA 1821 0.4338 MESHSNSTEYRWRAEEAIGGNAKALQALRELVIFPLLYSRQAKKLGIKWPQGLLLYGPPGTGKTSLVRAVVQECGAHMTMISPHSVHKAHAGESERILREAFAEASSHSTCGKPSVIFIDEIDVLCPRRDSRREQDVRIASQLFTLMDSNKPSSSMPRIVVVAATNRINAIDPALRRYGRFDAEIEVTAPTEEERFQILKLYTKKIPLDPSVDLKMIAASCNGYVGADLEALCREATTLAAKRFRDANGNVNHLTTIMEDWNNARSVVGPSITRGVTVEIPKVTWDDIGGLKELKKKLQQAVEWPIKHSEVFSRMGISPVRGILLHGPPGCSKTTLAKAAAHAAQSSFFSLSGAEMYSMYVGEGEELLRNTFHRARLAAPSIIFFDEADVVATKRGDSSSNSSTVGERLLSTLLTEMDGLEEATGILVLAATNRPYAIDAALMRPGRFDLVLYVPPPDSEARYEILSVHTRGMKLGNDVDLRRLAEDTERFTGAELEGLCKEAGIVALREDISATVVCNRHFQVVRNSVNPALTKEEIDSYSSFMKTSSSAFSRHLEPSLKLDRKKSSSHILGSIVKLGIISCILLAATKYFFMHEEQSVSEVAVT 606
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco11g0584 606 FunFam spermatogenesis-associated protein 5-like protein 1 457 543 - -
Acco11g0584 606 CDD RecA-like_CDC48_r2-like 294 454 - -
Acco11g0584 606 ProSitePatterns AAA-protein family signature. 159 177 IPR003960 GO:0005524|GO:0016887
Acco11g0584 606 PANTHER AAA-FAMILY ATPASE 16 548 - -
Acco11g0584 606 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 15 247 IPR027417 -
Acco11g0584 606 Gene3D - 273 457 IPR027417 -
Acco11g0584 606 CDD RecA-like_CDC48_NLV2_r1-like 17 187 - -
Acco11g0584 606 Gene3D - 458 549 - -
Acco11g0584 606 Gene3D - 190 272 - -
Acco11g0584 606 Pfam ATPase family associated with various cellular activities (AAA) 53 187 IPR003959 GO:0005524|GO:0016887
Acco11g0584 606 Pfam ATPase family associated with various cellular activities (AAA) 323 455 IPR003959 GO:0005524|GO:0016887
Acco11g0584 606 SMART AAA_5 319 458 IPR003593 GO:0016887
Acco11g0584 606 SMART AAA_5 49 191 IPR003593 GO:0016887
Acco11g0584 606 ProSitePatterns AAA-protein family signature. 426 444 IPR003960 GO:0005524|GO:0016887
Acco11g0584 606 Gene3D - 5 188 IPR027417 -
Acco11g0584 606 Pfam AAA+ lid domain 478 523 IPR041569 -
Acco11g0584 606 Pfam AAA+ lid domain 211 248 IPR041569 -
Acco11g0584 606 FunFam Cell division control protein 48 homolog B 10 188 - -
Acco11g0584 606 FunFam Cell division control protein 48-B-like protein 273 457 - -
Acco11g0584 606 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 281 543 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco11g0584 Acco-ChrAcco11 9469882 9476728 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco11g0584 254 558 Calmodulin-binding Proteins AT3G56690 44.625 7.99e-81 273