Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco11g0574 ATGCAACTACTTTGGCTTAAGAATGCTCCTAGTGTAGCTTTTCATTGTTCGAAGTTGCCCTCCAACGACTACTCCAATTTCGAGGTTCTCAACCAGCGTACATCAAATATTCCTTGTTGGCCTCTAGCAATTGCTCTAATTTCAAGGATTTCAACTAGTGTAGCTTTTTGGGGCCTTACCATATCAAACACTTCTCATCGGCGACGATTGGCTTCCTCTCCTACAAATGCACGCAAAGCCCTGCAACTCAGTCATAAATTCTTGAATTTCTCAACGGAAATTTACCTGATTATTGACTTCCGCCGACGTTTAAGGAAGCAAAAGGAAGACAATTTTTCGCGAAAGGGACATTTACTTATTGAAACTCTCATGGCTCCCAATGCAACAACCCTTAATCCAAGAGTTGCCAAGGCCTTCAGCGCCATGAATGACTTAGGAATTTCTCGTGATGAAGTGGAACCGGTGTTGCAAGAGCTGTTAAGATTGTATGATAAGAAATGGGAATATATTGAAGAAGATAACTATCGGACACTTATAGATGCATACTTTGAGCTTAAGGAAGATAAGGAAGTAAAAGGTAAAAGAAAAGCTCTCATCAGTTGTAATGGAGGAGAAAGAAAAACTCAACCATTGGCAGATGAAGACGATGTGCAATTGTTAACCATGGACAACTCAAGACAAATATTAGCTGCAGAAAAGAATGGAACGCCTTTAAATACTTCTGGACGGGAAATCATGGAATCATCTCACCGTTTGATGAGCAATACGAGACCTAAAATCGGTCCTCAATCATTGAAAACAAGAATTAGCGGGTTCGAAAGGATATCAAAGTTGCCTCGCACGGCCGTTACAGATATAAAATCAAATTATGAGAAAGAATATTCTGCAAGGCATGGGGAAGACCCTGTTGAAAAGCCTAGCTCTGTTCCTATTCTAAGAGAAAATATACCAAATGGACATTATAGGAAGGAGATGATAAAACCAAGAAATAGACATATCAATTTACATCTCGGATCCAGTTCAACAAGTTGCAGAGGTCCATCTGAGGTTATGACTAGTCATCCATTTATACGTGTGGAATCTGTGGATCTGGATCTGAACAGTGTCATTGAAGATTCTACGCATAATGACAGCCCCACAAGCAGCAAGGCTAATATTGACATTGCCTCTTCACCATCGGGAGAAGTGAAAATTTCCTTAAACTGTGGCCGCGCACTTAGACAGCCAAACTACAATATTCCAAGTTTAAATGCTGTTATGAAGTTAGAGGAGAAGCATCTTAAGTCTAGCAATATTGTAGGACCCGAATTTTCTATGGTGACCGCATTAAATGGTTTGTGTGAAAATTTCCTTAAATTGGGCATGAATACAAATAGAAAATGTTCACTTCCTGAGTTTAACCATGCAACCAGATTAACAAATGGCTCACAAGAAGCTGTTCCTCAAGACGATAGGAAGCTATTCCAGTTTCTTAGTGACATAACAAAGGGCTCGGAAAAGGTGAAGATATCTTTGATAGATGAGTATGGTAGTGGGGAATTGCCAAAGTTTAATTACATACCACATAATCTAATATATCAGAATGCTAATGTAAATATTTCACTGGCTCGTATTGCGGATGAAGGTTGCTGCTCAAATTGTATAGGAGACTGTCTTTCTCAATCACTACCTTGTGCATGTGCTCAAGAAACTGGTGGAGAGTTTGCTTACACAGTGCAGGGCTTGTTGAAAGACGAATTTCTAACATCTTGCACGTCAATGAAACTGGAACCTCAAGCTCATCAATTGGTGTACTGTCAAGAGTGCCCACTAGAGAGGTTTAAGAATGAATTCATACCTGAGCAATGCAAGGGGCATCTGATCAGGAAGTTCATTAAGGAATGTTGGAGGAAATGTGGATGTGACATGCAGTGTGGAAATCGTATAGTGTTCTTTACCGGTGGAAAAAAGGGCTGGGGCCTTAGAACACTGGAAGATTTGCCTAGGGGATCCTTTGTGTGTGAATATGTCGGCGAAATATTAACCAACATGGAGTTGTATGAAAGAATTATGCACAAAAATGGCAATGACAGACATACATATCCTGTAACCCTTGATGCAGACTGGGGTTCAGAAGGTGTTTTAAAGGATGAGGAGGCACTGTGTCTAGATGCCACATATAATGGAAATGTTGCCAGGTTTATCAACCATAGATGCTCAGATGCAAATCTGATTGACATTCCCGTTGAAGTGGAGACTCCCGATCGCCATTATTATCATCTTGCCTTCTTTACCAACAAGAAAGTAAGAGCTTATGAAGAGTTGACGTGGGATTATGGCATTGACTTTGATGATCATGATCACCCAATCAAAGCATTCCAATGTTGTTGTGGAAGCCCATTCTGCCATGAGAAGAAGCGTAAAGTTGGCCGAAAATCTCTTTGCAAGTTATGTGGAAAAAAACCAATGAAGCTCCCTATTTCAACCATTGCAACTGCTGCACCCAAACAACGTTCTTGA 2499 0.4046 MQLLWLKNAPSVAFHCSKLPSNDYSNFEVLNQRTSNIPCWPLAIALISRISTSVAFWGLTISNTSHRRRLASSPTNARKALQLSHKFLNFSTEIYLIIDFRRRLRKQKEDNFSRKGHLLIETLMAPNATTLNPRVAKAFSAMNDLGISRDEVEPVLQELLRLYDKKWEYIEEDNYRTLIDAYFELKEDKEVKGKRKALISCNGGERKTQPLADEDDVQLLTMDNSRQILAAEKNGTPLNTSGREIMESSHRLMSNTRPKIGPQSLKTRISGFERISKLPRTAVTDIKSNYEKEYSARHGEDPVEKPSSVPILRENIPNGHYRKEMIKPRNRHINLHLGSSSTSCRGPSEVMTSHPFIRVESVDLDLNSVIEDSTHNDSPTSSKANIDIASSPSGEVKISLNCGRALRQPNYNIPSLNAVMKLEEKHLKSSNIVGPEFSMVTALNGLCENFLKLGMNTNRKCSLPEFNHATRLTNGSQEAVPQDDRKLFQFLSDITKGSEKVKISLIDEYGSGELPKFNYIPHNLIYQNANVNISLARIADEGCCSNCIGDCLSQSLPCACAQETGGEFAYTVQGLLKDEFLTSCTSMKLEPQAHQLVYCQECPLERFKNEFIPEQCKGHLIRKFIKECWRKCGCDMQCGNRIVFFTGGKKGWGLRTLEDLPRGSFVCEYVGEILTNMELYERIMHKNGNDRHTYPVTLDADWGSEGVLKDEEALCLDATYNGNVARFINHRCSDANLIDIPVEVETPDRHYYHLAFFTNKKVRAYEELTWDYGIDFDDHDHPIKAFQCCCGSPFCHEKKRKVGRKSLCKLCGKKPMKLPISTIATAAPKQRS 832
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco11g0574 832 PANTHER INACTIVE HISTONE-LYSINE N-METHYLTRANSFERASE SUVR1-RELATED 124 802 - -
Acco11g0574 832 Pfam Pre-SET motif 494 641 IPR007728 GO:0005634|GO:0008270|GO:0034968|GO:0042054
Acco11g0574 832 Gene3D - 120 188 IPR043017 -
Acco11g0574 832 ProSiteProfiles Histone-lysine N-methyltransferase (EC 2.1.1.43) family profile. 106 832 IPR025776 -
Acco11g0574 832 Pfam Ubiquitin-binding WIYLD domain 134 187 IPR018848 -
Acco11g0574 832 Gene3D SET domain 494 798 IPR046341 -
Acco11g0574 832 ProSiteProfiles SET domain profile. 640 773 IPR001214 GO:0005515
Acco11g0574 832 SMART set_7 640 779 IPR001214 GO:0005515
Acco11g0574 832 MobiDBLite consensus disorder prediction 294 314 - -
Acco11g0574 832 Pfam SET domain 651 773 IPR001214 GO:0005515
Acco11g0574 832 CDD SET_SETDB-like 515 773 - -
Acco11g0574 832 SUPERFAMILY SET domain 501 795 IPR046341 -
Acco11g0574 832 SMART preset_2 491 633 IPR007728 GO:0005634|GO:0008270|GO:0034968|GO:0042054
Acco11g0574 832 FunFam SET-domain containing protein lysine methyltransferase family protein 494 798 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco11g0574 Acco-ChrAcco11 9322023 9330766 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco11g0574 625 773 C2H2 Transcription Factor Family AT2G23740 38.994 5.10e-25 110
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR SET Acco11g0574 Pre-SET 2.1e-17 No_clan