Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco11g0570 ATGAACCTGGAAGAGAAAGTGAGCTTGGACTTGGTTCAACCATCTGAACACTACTGCTATGTTCGTTGCAACTTCTGCAACACTGTGCTTGCGGTTGGGCTTCCATGTAAGAGGCTGCTGGACACAGTGACAGTGAAGTGTGGGCATTGTAGCAACCTGTCCTTCCTCAGCACCAGGCCTCCTCCTCCTTTGCATCACAATCACAACAACGAAACCCACCATCATCGTGATCATAACAACACTATTGATCACACACTCACCCTTCAGGGGTTTTATGGTGATTACAAAAAGGGACTAGCGTCGTCGTCGTCCTCCACCTCCTTAACTATGTCAAATGATCCAGGCTCCCCCAAGGCTGCACCTTTTGTTGTCAAACCTCCTGAGAAGAAACATCGACTTCCTTCGGCTTACAATCGCTTCATGAAAGAGGAGATACAGCGCATCAAAGCAGCCAACCCTGAGATTCCTCATCGGGAAGCTTTCAGCGCTGCTGCCAAAAATTGGGCAAGGTACATTCCAAATTCGCCAAGCACTTCAATTTCAGCAAGTTTAGATTTCATATATGACAATGGAATTGCGAGATTTATGGAACAGAAAGAGGTCAAGAGGAACACAAGGTCAAATCCATCGTATGTTTCACTAGCTAGTCAACTGTTTATCTTCCAAGCACTAATTACAACGTACAAACTTTGA 693 0.456 MNLEEKVSLDLVQPSEHYCYVRCNFCNTVLAVGLPCKRLLDTVTVKCGHCSNLSFLSTRPPPPLHHNHNNETHHHRDHNNTIDHTLTLQGFYGDYKKGLASSSSSTSLTMSNDPGSPKAAPFVVKPPEKKHRLPSAYNRFMKEEIQRIKAANPEIPHREAFSAAAKNWARYIPNSPSTSISASLDFIYDNGIARFMEQKEVKRNTRSNPSYVSLASQLFIFQALITTYKL 230
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco11g0570 230 Gene3D High mobility group box domain 114 175 IPR036910 -
Acco11g0570 230 PANTHER PROTEIN YABBY 6-RELATED 13 177 IPR006780 GO:0007275
Acco11g0570 230 MobiDBLite consensus disorder prediction 103 123 - -
Acco11g0570 230 FunFam protein CRABS CLAW isoform X3 123 183 - -
Acco11g0570 230 CDD HMG-box_SF 132 168 - -
Acco11g0570 230 Pfam YABBY protein 14 171 IPR006780 GO:0007275
Acco11g0570 230 SUPERFAMILY HMG-box 116 169 IPR036910 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco11g0570 Acco-ChrAcco11 9275848 9278207 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco11g0570 1 199 C2C2-YABBY Transcription Factor Family AT1G69180 56.650 1.14e-65 199
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2C2-YABBY Acco11g0570 YABBY 8.3e-57 CL0114