Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco11g0568 ATGGAATCTTGGCCTTATCTCTCAGAAGAAAAAGGCTATTTGATTTCTGATGAGATGGATTTTTCGCTCGAAGCTTTTAAGAGAGGCAAAAAAGGCAAAGAATCCTTTAACTTGGAGAGAGATGGTTTTGGTTCTAGCGTTGGGGAAGCTAAAAGCATGGAAGTTTTTGACCTAGGATTTCATGACTTGTTTCATAATGAGCTAGATAGAAATCGTAGTAAAAGAGTGGCTTCCTCTACCAATGTTATTGCCATGGATTCATCTTTTGCAGAACAAGAATCTCAGCCGACGTTTTTAGGTTCTCTAGTGGAATCTAAAAGTCCCAATTCATCATCACCGATTGATTTGAAGCTTGGGAGAATAGCAGATCGTAAGAATGATGCAAGTAGTGAAAAAATTACGAGGAGAGCTCGGTCTTCCGGCTCACCATCTCAAACACCTTTTTGTCAAGTTTATGGTTGTAACATGGATCTTAGCTTCTCAAAAGAGTACCACAAAAGGCATAGGGTTTGTGATGCTCACTCCAAGACAGCCAAAGTTATTGTTAATGGCATTGAGCAGAGGTTTTGTCAGCAGTGTAGCAGGTTCCATTTGCTAGCTGAGTTTGATGAGGGCAAGCGCAGTTGTCGCAGACGTCTAGCTGGACACAATCAACGCAGAAGGAAGCCTCAGTTTGATTACTTATCTGGTAAACCCTACAAGATGGTCCAGTTACGTCAAGGGACCAAATGTCTGGAGGCTTCATTTCAGAAGGGACCCCAGTTTGCCTCACAAGACACGATCAGTTGTGGCATATTGTATGAACAAACTGATCTCGGCATCACTCCTTACGGGAGCTGTGCTCTCTCTCTTCTGTCAGTTCAGTTGCAAAACCTACCATGCCACCCAGCAGGAAACCCTGGACCTAGTCCCCATGCTTGTCGCACCATCTGCACGAACCTCACTGACGAACAAGTTTCCAAAATAATTCATTTGGGCACAAACCCTGTGGACAAGTATGAGCAAAATGAGTCATCATATTCATCACAACAACATGGATTGTGCACCACGGAAGCTATAAAGAATGGATCCATATTGCTTTCTAATACTGATGATGCTCATAGTCTTCAGGTTTGTCAAACATCAGAATTATTGGATACCAAACACTATGATTCACCTGAGGAAGGAGCCACTGTTGATCTATTGCAATTGTCTTCACATCTTCAAAGGGTAGAGCGTCAGAGGAATTCATTTCTTCAGTGA 1242 0.4259 MESWPYLSEEKGYLISDEMDFSLEAFKRGKKGKESFNLERDGFGSSVGEAKSMEVFDLGFHDLFHNELDRNRSKRVASSTNVIAMDSSFAEQESQPTFLGSLVESKSPNSSSPIDLKLGRIADRKNDASSEKITRRARSSGSPSQTPFCQVYGCNMDLSFSKEYHKRHRVCDAHSKTAKVIVNGIEQRFCQQCSRFHLLAEFDEGKRSCRRRLAGHNQRRRKPQFDYLSGKPYKMVQLRQGTKCLEASFQKGPQFASQDTISCGILYEQTDLGITPYGSCALSLLSVQLQNLPCHPAGNPGPSPHACRTICTNLTDEQVSKIIHLGTNPVDKYEQNESSYSSQQHGLCTTEAIKNGSILLSNTDDAHSLQVCQTSELLDTKHYDSPEEGATVDLLQLSSHLQRVERQRNSFLQ 413
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco11g0568 413 Pfam SBP domain 149 222 IPR004333 GO:0003677
Acco11g0568 413 Gene3D - 139 210 IPR036893 GO:0003677|GO:0005634
Acco11g0568 413 PANTHER SQUAMOSA PROMOTER-BINDING-LIKE PROTEIN 4 99 306 IPR044817 GO:0003677
Acco11g0568 413 FunFam Squamosa promoter-binding-like protein 14 140 210 - -
Acco11g0568 413 ProSiteProfiles Zinc finger SBP-type profile. 146 223 IPR004333 GO:0003677
Acco11g0568 413 MobiDBLite consensus disorder prediction 125 145 - -
Acco11g0568 413 SUPERFAMILY SBT domain 147 228 IPR036893 GO:0003677|GO:0005634
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco11g0568 Acco-ChrAcco11 9220811 9226398 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco11g0568 114 248 SBP-box Gene Family AT1G69170 61.111 1.17e-50 174
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF SBP Acco11g0568 SBP 9.1e-31 No_clan