Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco11g0549 ATGATGTGTATTTCGGCCACGATTAATGAATTTGCAGTGACGACAACTAATAAGGCAATAGAAGCATTGGAGTTGTTGAGAGAAAACAGAAACAAGTTTGACCTGGTTATCAGTGATGTTCATATGCCAGACATGGATGGATTTAAGCTACTCGAGCATGTAGGACTTGTGATGGACTTATCAGTCATAATGTTGTTTGCACATGGTGACCCAAAACTTGATGAAGGGAATTACCCATGGAGCATGTGA 249 0.4016 MMCISATINEFAVTTTNKAIEALELLRENRNKFDLVISDVHMPDMDGFKLLEHVGLVMDLSVIMLFAHGDPKLDEGNYPWSM 82
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco11g0549 82 PANTHER TWO-COMPONENT RESPONSE REGULATOR 10 72 IPR045279 GO:0009736
Acco11g0549 82 Pfam Response regulator receiver domain 10 72 IPR001789 GO:0000160
Acco11g0549 82 SUPERFAMILY CheY-like 10 72 IPR011006 -
Acco11g0549 82 Gene3D - 2 76 - -
Acco11g0549 82 ProSiteProfiles Response regulatory domain profile. 1 82 IPR001789 GO:0000160
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco11g0549 Acco-ChrAcco11 8704485 8704956 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco11g0549 10 72 Response Regulator Gene Family AT2G25180 79.365 5.59e-28 103
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Others Acco11g0549 Response_reg 8.6e-10 CL0304