Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco11g0509 ATGAGTCCTAGTGATGATATCAGAGGGAACAACCCATTCCTCTTATTCCCACAAAACATCAACACCTTTCTTCCCGACACAAACCTTTTCACAAACCTCGACATATTCAACGACCACCTTGGGACAATCCATCATCATCATCATCTTCTTCACAGTGACCTTCATAATTATAATGGTGTTCCTTCTTCTTCAACCTCTGATGAAGCTGAAGATCAGAAGCAGACAATCATGATCAACGAGAGGAAACAGAGACGAATGATATCGAACAGAGAGTCAGCTCGAAGGTCAAGGATGAGGAAGCAGAGACACATGGACGAGTTGTGGTCGCAGGTTGTTAGGCTCAGAACAGAGAATAACAACCTTATCCATAGGCTTAACCATGTTTCAGAGTCCCATGATAGGGTTGTTCAGGAGAATGCTAGGCTCATAGAAGAAACTTCTGATCTTCGCAAAATGGTCGCTGATTTGCAGATTGGCTCTCCTTTTGCCAACGCCCTCACGGATTTTGATGACTTCTGA 519 0.4374 MSPSDDIRGNNPFLLFPQNINTFLPDTNLFTNLDIFNDHLGTIHHHHHLLHSDLHNYNGVPSSSTSDEAEDQKQTIMINERKQRRMISNRESARRSRMRKQRHMDELWSQVVRLRTENNNLIHRLNHVSESHDRVVQENARLIEETSDLRKMVADLQIGSPFANALTDFDDF 172
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco11g0509 172 FunFam BZIP transcription factor 79 130 - -
Acco11g0509 172 SUPERFAMILY Leucine zipper domain 81 131 IPR046347 GO:0003700|GO:0006355
Acco11g0509 172 CDD bZIP_plant_GBF1 82 133 IPR045314 GO:0003700|GO:0006355
Acco11g0509 172 Pfam bZIP transcription factor 81 131 IPR004827 GO:0003700|GO:0006355
Acco11g0509 172 PANTHER BASIC LEUCINE ZIPPER 43-RELATED 32 165 IPR044521 -
Acco11g0509 172 SMART brlzneu 77 141 IPR004827 GO:0003700|GO:0006355
Acco11g0509 172 ProSitePatterns Basic-leucine zipper (bZIP) domain signature. 84 99 IPR004827 GO:0003700|GO:0006355
Acco11g0509 172 Gene3D - 79 134 - -
Acco11g0509 172 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 79 142 IPR004827 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco11g0509 Acco-ChrAcco11 7923351 7923869 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco11g0509 64 163 bZIP Transcription Factor Family AT3G30530 68.317 3.79e-43 139
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bZIP Acco11g0509 bZIP_1 4.1e-12 CL0018