Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco11g0499 ATGATGATTTTTGCCGCGTCGCTTGCTTTCGGTCACCATTTTGATGCGATTCAGACTGGCCGCTTGAACATGGTTGAAATGTTTTTGTCGGTCTGTTTTTGTCTTAGCATGGTTACCGTCGTCGATTTTCATTGCGATGATGCTTTCATTGCTCTTAAAGTAGTCAGACGTATCAAACCTGAACTGCTCCTTACTTGGACAATTTCTGCTTCTGTAATTACTGTTAAGAGTGGTTACTTGACTACCTTGAAGTTGGGCTTTTCAATGGCTCAAGATTCTTCCTGCACAGACTCAAATTTCAAACGCCAAGGTCTCTTGAAAGATCAAGTTCGTTTGGTTGAAAGGAAAGAATCTGATCGCTATGAGATTGTCCCAATCCATGGTCTTCTATCCTTTGACAAGGGTTTCTTTATAGTAATCCGTGCTTGCCAAATGTTAGCCCAGAAAAATGATGGAATAATATTGGTAGGTTTGGCTGGCCCTTCAGGGGCTGGTAAGACCATATTTACAGAAAAAATACTCAACTTCATGCCCGACATTGCAGTCATTTCGATGGACAGTTACAATGATTCCAGTCGAATTGTTGATAGGAACTTTGATGATCCACGCTTAACAGACTACGATACGCTGCTCCAGAATGTCCATGATTTGAAGGAAGGAAAATCAGTTGAGGTTCCAATCTATGATTTTAAGTCCAGTTCACGCACAGGATACAGAACAGTTGAAGTCCCCAGCTCCCGCATTGTGATCATAGAGGGCATCTATGCATTGAGTGAGAAGTTGCGACCTCTACTGGACCTTCGAGTATCTGTCACAGGTGGAGTTCACTTGGACCTTGTCAAACGAGTAATTCGTGACATTCAACGTGCTGGCCAAGAACCTGAAGAAATTATTCATCAAATATCTGAGACGGTATACCCAATGTATAAGGCCTTTATTGAACCAGATCTTCAGACAGCACATATCAAAATTGTCAACAAGTTCAATCCATTTACTGGTTTTCAAAATCCTACCTACATATTAAAGTCAGCAAGGAAAGTAACTGTTGATGAAATTAAAGCTGTTCTCTCTGAAGATTATAAGGAAACAACAGAGAAGACTTATGATATATATCTTCTACCTCCTGGGGAAGATCCTGAAACTTGCCAATCATACCTACGGATGCGGAATAAGGATGGGAAATACAGTCTAATGTTTGAGGAATGGGTAACTGATAATCCTTTTGTCATATCACCAAGAATTACTTTTGAGGTAAGTGTGCGCTTACTGGGTGGACTGATGGCCTTGGGGTACACGATTGCCGCCATCCTTAAAAGAAACAGCCATGCATACTCCGATGATAGGATTTGTGTGAAACTTGATTGGCTCGAGCAACTTAATAGACATTATGTTCAGGTGCATGGTAGAGATCGCATGGTTGTAAAATATGTGGCAGAGCAGCTGGGTCTGGATGGCTCTTACATTCCTCGTACCTACATTGAGCAAATTCAACTTGAAAAGCTTGTAAATGAAGTTATGGCCTTGCCAGATGATTTGAAGACAAAGCTTAGCCTAGATGAGGATTTGGTGTCAAGCCCCAAAGAAGCACTCTCTCGAGCCTCTGCGGATAGGGTCACCATGTTAAATAAGCATGTCAGAAGCTTGTCACAATCATATACAAATCAAAGGGACAAGAATAATCTTTCCAAACTTGCAATATATGCTTCCAAGAATTGTGGGTTTAGTGATAGAAATCTGGATTCGCCAACAACACCAACAAACCAGGCATCCATCACTCAGCTTTCCGAACAAATCTCCTCTCTTAATGATAGAATGGATGATTTTACAAATCGTATTGAGGAGCTGAACTCAAAGTTAGCCATCAATAAAAATTCTCTCAGCCAGCAGAATATGTCCCTCCAAGCTGAAGTCTGCAATGGTTCTGCTCCTACCTCTTACTTCTTCACCGGTCTGGGCAATGGCTCCTTGACTGGATCCATTATACCAAATTCCTCGTCTTCTTTGCAGTCACCCAAAGAGTTAATTGAAGAGTTATCAGGTATTGCAAGGAGCCAGCGTCAGATGATACTTCAACTGGACAATCTGAATAATCTTCTCCAAGGAAGCTGCAAGAGAACCATGGCTTCTTCTGTTGAATCAGAGTCCTCCAGTGGTGTGCGTGTTATGATGACTGTGGCTATTGGGGTTTTGGGGATCTTCTTGATGAAGGGTTTGTTCGACAGAAATTGA 2229 0.4172 MMIFAASLAFGHHFDAIQTGRLNMVEMFLSVCFCLSMVTVVDFHCDDAFIALKVVRRIKPELLLTWTISASVITVKSGYLTTLKLGFSMAQDSSCTDSNFKRQGLLKDQVRLVERKESDRYEIVPIHGLLSFDKGFFIVIRACQMLAQKNDGIILVGLAGPSGAGKTIFTEKILNFMPDIAVISMDSYNDSSRIVDRNFDDPRLTDYDTLLQNVHDLKEGKSVEVPIYDFKSSSRTGYRTVEVPSSRIVIIEGIYALSEKLRPLLDLRVSVTGGVHLDLVKRVIRDIQRAGQEPEEIIHQISETVYPMYKAFIEPDLQTAHIKIVNKFNPFTGFQNPTYILKSARKVTVDEIKAVLSEDYKETTEKTYDIYLLPPGEDPETCQSYLRMRNKDGKYSLMFEEWVTDNPFVISPRITFEVSVRLLGGLMALGYTIAAILKRNSHAYSDDRICVKLDWLEQLNRHYVQVHGRDRMVVKYVAEQLGLDGSYIPRTYIEQIQLEKLVNEVMALPDDLKTKLSLDEDLVSSPKEALSRASADRVTMLNKHVRSLSQSYTNQRDKNNLSKLAIYASKNCGFSDRNLDSPTTPTNQASITQLSEQISSLNDRMDDFTNRIEELNSKLAINKNSLSQQNMSLQAEVCNGSAPTSYFFTGLGNGSLTGSIIPNSSSSLQSPKELIEELSGIARSQRQMILQLDNLNNLLQGSCKRTMASSVESESSSGVRVMMTVAIGVLGIFLMKGLFDRN 742
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco11g0499 742 Gene3D - 154 333 IPR027417 -
Acco11g0499 742 ProSiteProfiles CYTH domain profile. 340 498 IPR023577 -
Acco11g0499 742 Coils Coil 591 636 - -
Acco11g0499 742 PANTHER URIDINE KINASE 115 511 - -
Acco11g0499 742 Pfam CYTH domain 352 492 IPR023577 -
Acco11g0499 742 PRINTS Uridine kinase signature 220 235 - -
Acco11g0499 742 PRINTS Uridine kinase signature 153 170 - -
Acco11g0499 742 PRINTS Uridine kinase signature 276 286 - -
Acco11g0499 742 PRINTS Uridine kinase signature 312 325 - -
Acco11g0499 742 CDD UMPK_like 155 327 - -
Acco11g0499 742 Gene3D - 344 501 - -
Acco11g0499 742 SUPERFAMILY CYTH-like phosphatases 349 495 IPR033469 -
Acco11g0499 742 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 154 324 IPR027417 -
Acco11g0499 742 Pfam Phosphoribulokinase / Uridine kinase family 156 324 IPR006083 GO:0005524|GO:0016301
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco11g0499 Acco-ChrAcco11 7721723 7730065 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco11g0499 141 324 PRT Gene Family AT1G55810 29.381 1.04e-18 87.8