Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco11g0497 ATGCAAATTTCTTCTGATTCATCAATAATGAAAAGAAGAGAAGATGTTTCTTTCTCCATTTCAGCTTTCTTCATCATCATCTTCTTCTTCTTCTTCTTCTTCTGCACTTCAGTATCTGAGTTGCTTTCTTCTGATGGTGTCAACTATGAAGTACAAGCTCTTATAGGAATTAAAAGTTCTTTAAAGGATCCCAACAATGCCCTTCATAATTGGGATATGTATGATGTGGAACCTTGTAACTGGGATTTCATATCTTGCACTGGTGGTTCTGTGATTAAATTGGAATTTCCAAGCCAGAACTTTTCTGGTTCTCTTTCCCCAAGCATTAGCAACTTAACCAATCTCATCAATCTGAGCCTGCAAGGTAATAATATAACAGGACCAATTCCTTCTGAGGTTGGGATGATGCAAAAGCTTCAAACTCTTGATCTTTCTCATAATTCCTTCACTGGTCAACTTCCAGAGAGTCTCTCCCACATGAAGAGTCTCAATTATCTGAGGCTGAACAATAATAGTCTTATAGGACCAATACCTTCCTCTTTGGCTCACATGACCCAGCTTGCTATTCTGGACATATCTTATAATAACTTGACTGGACCTCTACCTACAATAAATGCAAAAACATTCAATCTTCTAGGAAATCCCCTGATTTGTGCCAGTAGAACTGACCAACATTGCTTCAGAACAACACAACTTTCTACTAGTTTTAATAACTCTCGAGGTTCACAAGCCACCAGTAAACAAAAGAATCACAAACTTGTCTTGGCACTTGCCTTAACAATAAGCTGCATCAGCTTACTAACTCTGGTGTTTGGCTTCCTCTGGTGGAGACAAAGATCAAGCAAACAAGTTTTCTCTGATATTAATGAACAAATGCAAGAAGATGTGGGCCTTGGAAACTTGAGGAAGTTCCACATAAGAGAACTCGAGGTTGCGACGAACAAGTTCAGCAGCAAGAACTTGGTTGGGAAAGGAGGATATGGGAATGTGTACAAAGGCTATCTATCAGATGGTGGGGTCATAGCTGTGAAAAGGCTTAGAGATGGAAGTGCCATTACAGGGGAGATTCAGTTTCAGACTGAAGTTGAGATGATCAGCCTCGCTGTACATCGAAACTTGCTTCGTCTCTATGGATACTGCATCACTCCTACAGAGAGACTCTTAGTTTACCCTTTCATGTCCAATGGTAGTGTCGCTTCTCGTCTCAAAGTAAAGCCTACTTTAGAGTGGAGCACAAGGAAGAGGATAGCTTTGGGAGCAGCAAGAGGGTTAGTATACCTACATGAGCAATGTGAACCTAAGATTATTCATAGGGATGTGAAGGCTGCAAATATATTGCTTGATGAGTATTGTGAAGCTGTGGTTGGGGATTTTGGGTTGGCTAAGCTGTTAGACCATAGGGACTCACATGTCACCACAGCTGTTCGAGGAACTGTTGGCCATATAGCACCAGAGTACCTCTCAACAGGCCAATCTTCTGATAAAACTGATGTCTTTGGCTTTGGCATTCTTCTCCTCGAACTCATCTCCGGCCGCACAGCTCTTGAATTCGGAAAAGCAGCTAACCAGAAAGGAGCCATGCTCAATTGGGTGAGGAAAATGCATCAAGAGAAGAAACTTGACTTGTTGATTGACAAGGACCTTAGGAACAACTATGACAGAATTGAACTCGAAGAATTAGTTCGAATAGCACTCTTGGGTACCCAGTTCCTTCCAGCTCATAGACCCAAAATGTCTGAAGTGGTTAGAATGCTTGAAGGAGATGGCCTTGCAGAGAAATGGGAAGCTTCAAAGGGATCATCTGAATCAACAAGGAGCAGAGCAAATGAGCTATCTTCTTCAGAACGCTACTCCGATCTCACCGACGATTGTACACTGTTCAATCAGGCCATGGAGCTTTCTGGTCCCAGGTAA 1914 0.4195 MQISSDSSIMKRREDVSFSISAFFIIIFFFFFFFCTSVSELLSSDGVNYEVQALIGIKSSLKDPNNALHNWDMYDVEPCNWDFISCTGGSVIKLEFPSQNFSGSLSPSISNLTNLINLSLQGNNITGPIPSEVGMMQKLQTLDLSHNSFTGQLPESLSHMKSLNYLRLNNNSLIGPIPSSLAHMTQLAILDISYNNLTGPLPTINAKTFNLLGNPLICASRTDQHCFRTTQLSTSFNNSRGSQATSKQKNHKLVLALALTISCISLLTLVFGFLWWRQRSSKQVFSDINEQMQEDVGLGNLRKFHIRELEVATNKFSSKNLVGKGGYGNVYKGYLSDGGVIAVKRLRDGSAITGEIQFQTEVEMISLAVHRNLLRLYGYCITPTERLLVYPFMSNGSVASRLKVKPTLEWSTRKRIALGAARGLVYLHEQCEPKIIHRDVKAANILLDEYCEAVVGDFGLAKLLDHRDSHVTTAVRGTVGHIAPEYLSTGQSSDKTDVFGFGILLLELISGRTALEFGKAANQKGAMLNWVRKMHQEKKLDLLIDKDLRNNYDRIELEELVRIALLGTQFLPAHRPKMSEVVRMLEGDGLAEKWEASKGSSESTRSRANELSSSERYSDLTDDCTLFNQAMELSGPR 637
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco11g0497 637 ProSitePatterns Protein kinases ATP-binding region signature. 322 344 IPR017441 GO:0005524
Acco11g0497 637 Pfam Leucine rich repeat N-terminal domain 48 86 IPR013210 -
Acco11g0497 637 FunFam Somatic embryogenesis receptor kinase 1 285 392 - -
Acco11g0497 637 Gene3D Phosphorylase Kinase; domain 1 285 392 - -
Acco11g0497 637 Gene3D Transferase(Phosphotransferase) domain 1 393 604 - -
Acco11g0497 637 PANTHER SOMATIC EMBRYOGENESIS RECEPTOR KINASE 1 27 596 - -
Acco11g0497 637 Pfam Protein kinase domain 317 530 IPR000719 GO:0004672|GO:0005524|GO:0006468
Acco11g0497 637 ProSitePatterns Serine/Threonine protein kinases active-site signature. 435 447 IPR008271 GO:0004672|GO:0006468
Acco11g0497 637 Gene3D Ribonuclease Inhibitor 47 228 IPR032675 -
Acco11g0497 637 SMART serkin_6 316 566 IPR000719 GO:0004672|GO:0005524|GO:0006468
Acco11g0497 637 MobiDBLite consensus disorder prediction 593 616 - -
Acco11g0497 637 Pfam Leucine rich repeat 138 197 IPR001611 GO:0005515
Acco11g0497 637 ProSiteProfiles Protein kinase domain profile. 316 571 IPR000719 GO:0004672|GO:0005524|GO:0006468
Acco11g0497 637 SUPERFAMILY L domain-like 49 242 - -
Acco11g0497 637 FunFam LRR receptor-like serine/threonine-protein kinase ERL1 47 207 - -
Acco11g0497 637 MobiDBLite consensus disorder prediction 601 616 - -
Acco11g0497 637 FunFam Somatic embryogenesis receptor-like kinase 1 393 605 - -
Acco11g0497 637 SUPERFAMILY Protein kinase-like (PK-like) 301 587 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco11g0497 Acco-ChrAcco11 7696219 7701429 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco11g0497 20 637 Receptor kinase-like Gene Family AT5G16000 65.605 0.0 835
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-II Acco11g0497 Pkinase 1.1e-40 CL0016