LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Acco11g0492	ATGCTAGAGTCTATAAGTAGCAGTCAATTAAAAGCAACCATAGAGAAACACCACGCACCCCATCTCATGGAGGCCGTCAAAGTCATCTCCATAACTACGATCAGAGCACGAAGATGTCATAAAAATGGCGAGTCACCTGAACAAATCGATCTGAATCCATGGGATCTTCAATTTCTATTACATGGGTATGGTCAAAAGGGGCTTCTATTTCGCAAACCCTCCTCCTCCTCCACATCATCTTCAATACACAGAGAATCAGTGATCGAGCACCTGAAGGAGTCACTTTCTTCCGCCCTCGACTTCTTCCTGCCGCTGACCGGCCGTCTTGTTGTCGTCCCCCGTGGAAGCGGTGATGACGCTTACTCTGTATTCATCACGTGTAACAACACCGGAGTAAGCTTTGTTCATGCCATCACAGAGAACACTACAATTGCCGACGTCCTTGAACCAACTTATGTTCCTCCAATTGTCTCCTCTTTTTTTCCACCAGGTAATATCAAGTGCTTTGAAGGAACTCGGGTTCCATTAATGGTGGTTCAAGTCACAGAGCTCTTGGATGGCATCTTCTTGGCTTGTTCCATGAACCATTGTATTGCTGACGTGAAGCCTTACTGGAATTTCTTAAACGCATGGGCTCAGATCTCTCGAAATGGTCTCAACCCCATAGCCCCGAATTCAAAGCTCGCTTCATTTAAACGATGGTTACCTCATGGGAATATTGATCGCCCAATAACAATCCCATTCAGAGCAATGATAGAGAATCATCATCTCAAGGAGTCAACAAAGACGACTCAATCACCACCATTTTCGAGGAGCATCTTTCACTTTAACAGAGAAAAAATTGCTCAACTCAAAACAAAGGCTAATTCCGAGATACAAGATGGTGTCACCAGCAACAAAATCTCCTCCCTGCAAGCTGTTTTAGCCCATGTTTGGAGGTCTTCGATAAGAAATCAGAACCTTGACCCGGAAGATAAAGTCACTTACGGATTCCTCATATCTGCACGTTCCAGAGTTTCAAATCCACCAATTCCAGACAACTATTTTGGAATTACCGTGCAATTCACCACTGTGACGATGAAAGTAAGGGACTTAGTGGGACATGGAGGCCTAGGGAAGTTTGCTTCAGAGATGAACAGGGCAATCTCATCATGCACGGAAGAGAAGATCAAGAGGGACTTTGAAGCTTGGACACGAAATCCAACAATGTACACAGAGCATGCCACTATCGGAAAGTTTATGAAAACCAGCAGCTCCCCAAGAGCCAACTTTTATAACCTCGACTTCGGCTGGGGGACGCCTGTGGCGGTTCGTGGTGGCCAAGCAAATGCAAAGCAGTGGAAGCTGATGGCTGATGCCGGAGCAGAAGAAGGTAGCTTCGACATTGAGTTGTGCGCTTCTTATGAAATATTAAAGGCTTTGGCAAGAGACCCTGAGTTCATGCATGCGGTAGAATTGCCTCGGTCGCCGGCGGAGTTATCACCGTCAGGTAAAGTCGCACGGACTCGACTATGA	1515	0.4614	MLESISSSQLKATIEKHHAPHLMEAVKVISITTIRARRCHKNGESPEQIDLNPWDLQFLLHGYGQKGLLFRKPSSSSTSSSIHRESVIEHLKESLSSALDFFLPLTGRLVVVPRGSGDDAYSVFITCNNTGVSFVHAITENTTIADVLEPTYVPPIVSSFFPPGNIKCFEGTRVPLMVVQVTELLDGIFLACSMNHCIADVKPYWNFLNAWAQISRNGLNPIAPNSKLASFKRWLPHGNIDRPITIPFRAMIENHHLKESTKTTQSPPFSRSIFHFNREKIAQLKTKANSEIQDGVTSNKISSLQAVLAHVWRSSIRNQNLDPEDKVTYGFLISARSRVSNPPIPDNYFGITVQFTTVTMKVRDLVGHGGLGKFASEMNRAISSCTEEKIKRDFEAWTRNPTMYTEHATIGKFMKTSSSPRANFYNLDFGWGTPVAVRGGQANAKQWKLMADAGAEEGSFDIELCASYEILKALARDPEFMHAVELPRSPAELSPSGKVARTRL	504

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Acco11g0492	504	PANTHER	FAMILY REGULATORY PROTEIN, PUTATIVE (AFU_ORTHOLOGUE AFUA_3G14730)-RELATED	40	481	-	-
	Acco11g0492	504	Gene3D	-	23	238	IPR023213	-
	Acco11g0492	504	Gene3D	-	249	476	IPR023213	-
	Acco11g0492	504	Pfam	Transferase family	33	481	-	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Acco11g0492	Acco-ChrAcco11	7533303	7534817	Tandem

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Acco11g0492	91	476	Monolignol Biosynthesis Gene Families	AT5G48930	27.512	1.56e-18	86.3