Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco11g0449 ATGAACATCATGGCAACCACCACTCTGGCAACAATCTCCAGATTTTCTTCTCTACTGTTCACCATGCTCTTCAACTACCTCAAACTAGCTTTGTCCCATTTCAAATGGGGTTTAGAGTTTCTTCTTTACCACCCATTTCACAGCCTTCGTCTTCATCATCATCAACCTCTTCAAGAGATTCAACAGATCTTTACAGAAGAAGAACAAGTGGAGATTTGGCAACCGCGTGAAGGAGGAGGAGAAGAAGTGGATTGTGCAGTGTGTTTGAACAAGATTGTTGGAGGAGATGAAGTTAGAGTGTTGAGATGCGAACATGTTTTTCACAGAGAATGTTTGAATCAATGGGTTGGTCTCAGGAACTTTACTTGTCCACTTTGTAGGAACTTTTTGGGTTCTGGGTTTGGGTCTGTTAACGGTGATGGAGGAGAAGCACTTCATGTTCTTTTCTTTAAGTTTTCTTCATTCTCTGATAATTCTGATGAGCGTGATAACTGGTGGCTACGACACCATTTCCCTTCTTCCATCCTTCATTTTCATACTGCCATGCTTCCTAGCCTTCGTTTCGTGAAGGAAAAAGGTGAACTTGCAGAGCCAGGAGGAGGTGAGTTTTCAAGTTGA 618 0.4239 MNIMATTTLATISRFSSLLFTMLFNYLKLALSHFKWGLEFLLYHPFHSLRLHHHQPLQEIQQIFTEEEQVEIWQPREGGGEEVDCAVCLNKIVGGDEVRVLRCEHVFHRECLNQWVGLRNFTCPLCRNFLGSGFGSVNGDGGEALHVLFFKFSSFSDNSDERDNWWLRHHFPSSILHFHTAMLPSLRFVKEKGELAEPGGGEFSS 205
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco11g0449 205 ProSiteProfiles Zinc finger RING-type profile. 85 127 IPR001841 -
Acco11g0449 205 PANTHER RING ZINC FINGER PROTEIN-RELATED 55 130 - -
Acco11g0449 205 SUPERFAMILY RING/U-box 66 132 - -
Acco11g0449 205 SMART ring_2 85 126 IPR001841 -
Acco11g0449 205 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 63 131 IPR013083 -
Acco11g0449 205 Pfam Ring finger domain 84 127 IPR001841 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco11g0449 Acco-ChrAcco11 6857789 6860074 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco11g0449 84 132 C3H Transcription Factor Family AT1G15100 59.184 3.68e-14 65.5