Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco11g0448 ATGACTAGTGTTGCAGTAATCATGAAATTTTCTATTCAACTATTCACAATGCTCTTCAACTTCCTCAAGCTAGCTTCTCAAAATTTCAAATGGTTCATAGAATTCATCACCTACCACCCATTTCACAGCCTACTTGTTCACCATCCTCATCATCAACCTTTTCTTCAAGAGTTTGAGATGGTCACAGGGGAAGAAGAACGAGTCGAAATATGGCATCCTCGCGAAGGAGGAGGAGGAGGAGAAGAAGTGGATTGTGCGGTGTGTCTGAGCAATATTGGTGAAGGAGATGAAGTTAGAGTGCTGAGTTGTGAACATGTTTTTCACCGAGGTTGTTTGAATCAATGGACTGGTCTCAGGAACAATACTTGTCCTCTTTGCAGGAACTTTCTGGGAGGCACAAGACGTGTGATTTTCTATGGGTTTTCTGAGACTCGTCAAGATCGTGAGAATTGGTGGCTTCGCTAA 465 0.428 MTSVAVIMKFSIQLFTMLFNFLKLASQNFKWFIEFITYHPFHSLLVHHPHHQPFLQEFEMVTGEEERVEIWHPREGGGGGEEVDCAVCLSNIGEGDEVRVLSCEHVFHRGCLNQWTGLRNNTCPLCRNFLGGTRRVIFYGFSETRQDRENWWLR 154
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco11g0448 154 PANTHER RING ZINC FINGER PROTEIN-RELATED 56 130 - -
Acco11g0448 154 ProSiteProfiles Zinc finger RING-type profile. 85 127 IPR001841 -
Acco11g0448 154 Pfam Ring finger domain 84 127 IPR001841 -
Acco11g0448 154 CDD RING-H2_PA-TM-RING 84 127 - -
Acco11g0448 154 SUPERFAMILY RING/U-box 84 130 - -
Acco11g0448 154 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 63 130 IPR013083 -
Acco11g0448 154 SMART ring_2 85 126 IPR001841 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco11g0448 Acco-ChrAcco11 6840133 6840597 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco11g0448 17 130 C3H Transcription Factor Family AT1G15100 35.965 1.97e-13 62.4