Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco11g0446 ATGTACGAATTAGAGACGACAGCTGGGTTTTCTGCAGAAACAGAGTCGTTTTTGTCAGAAGATTGCTTCTCCCAAATCGGTTCTTCTTCTGTGGCTTCACACACTCATAACCCTAATTTTGCCGAGAATGTGGGTCTTTCTTTGGAAACTTTAGCGTTTTCTTCACAAGACACTATGATTCCCAACATCGATGCTTCGTCGTTGATTGAACCAAACCCTTACGGTAATGATAGTATTGTCAATTCCAATTTGGTGGATGAGGTGAATCGTCTTGGCTCAAATCAGCTAGTAATTCCATTTGAACAGTCCAAATTCGACACTTCTATGAACTTCAATCACCAAAATTATCATCATCAGCTTCAAAATCAACCACATCCTTACCCTGCAACTTCAGATCTTAATCACTGCAATTTTCTCTATAGCTTGCCCTGTAGTTCTTCCATTTCTTCAATCCTAAACTCAGCTACCCAGAAAAATAATTTTGAAATTAAAATGGATCATTCTGGGCCTGGCCATCCAACATTGGGTTTGTTGGAAAGTACAAATGTGTCCTCCTCTGTTTTGTTGCAGGACCCATTTTCTGGAGCAAACAGAGAGTGGTTTCAATCTCTGTCCGTGAGAAATGATATTCTGATGATGTTTGGTGGGGATGATGATGATGACAAAGAAGGTGGGAGTGGGGTTATTTCTAATTTAGATGCCGGTCGCGGAAGAGAATTTGGTGATAGTAATAATGATTTCCTCAAGTGTTCCCATGATTTGGTTCCTAATGGAAGATCAAAGGGAATAGGAAGAGGAGCCAAAAGAGTCAGACAGGTCACTATTGAGAAGAAAAGGAGAGTGGATTTTACTAGCAAGTTTGATGCCTTGAAAGAACTCATTCCAAATCCCACTAAGAATGATAGAGCATCTCTGCTTTGTGGTGCTATTGAGTACATCCAAGAGCTTCGAAGATCAGTGCATGATCTCACATTGTTAGTGAACAAAAAGAGATCATGTGGGAGAGAAAGGACCAAGAGGCGCAAGGTTGAGAATGAAGAAGAAGAAGAAGAACCTTTAGGGGACTTGGAGAGCTGCAATAATAACTTGAAGCCAGTGATCAGTGAAGCAGATCATCATCATCATCATCAACTTCTTCCAATCAATAGATGCATGATTAGGAGCACTTCTTGGCTTCAGAAGAAATCTGAAGACACAGAGGTTGATGTTCGAATAGTTGAAAACGATTTGACCATCAAGCTTGTGCAGAGAAAGAACACTAATTGCTTGCTTTATGCTTCCAAGGCTCTGGATGAACTTGAGCTTGATCTTCAACATGTTGCTGGTGGCCACATTGGCGATTTCTGCAGTTTTTTGTTCAACAGCAAGATATATGAAGGTTCTTCTGTGAGTGCGAGTTTCATAGCCAACAAGTTTATAGAAATCATGGAATCAAACTTGAAAGAGAGCCATTAA 1455 0.4034 MYELETTAGFSAETESFLSEDCFSQIGSSSVASHTHNPNFAENVGLSLETLAFSSQDTMIPNIDASSLIEPNPYGNDSIVNSNLVDEVNRLGSNQLVIPFEQSKFDTSMNFNHQNYHHQLQNQPHPYPATSDLNHCNFLYSLPCSSSISSILNSATQKNNFEIKMDHSGPGHPTLGLLESTNVSSSVLLQDPFSGANREWFQSLSVRNDILMMFGGDDDDDKEGGSGVISNLDAGRGREFGDSNNDFLKCSHDLVPNGRSKGIGRGAKRVRQVTIEKKRRVDFTSKFDALKELIPNPTKNDRASLLCGAIEYIQELRRSVHDLTLLVNKKRSCGRERTKRRKVENEEEEEEPLGDLESCNNNLKPVISEADHHHHHQLLPINRCMIRSTSWLQKKSEDTEVDVRIVENDLTIKLVQRKNTNCLLYASKALDELELDLQHVAGGHIGDFCSFLFNSKIYEGSSVSASFIANKFIEIMESNLKESH 484
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco11g0446 484 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 265 327 IPR036638 GO:0046983
Acco11g0446 484 Gene3D - 264 331 IPR036638 GO:0046983
Acco11g0446 484 MobiDBLite consensus disorder prediction 336 355 - -
Acco11g0446 484 SMART finulus 273 322 IPR011598 GO:0046983
Acco11g0446 484 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 267 316 IPR011598 GO:0046983
Acco11g0446 484 PANTHER TRANSCRIPTION FACTOR BHLH91 106 479 IPR045895 GO:0006355|GO:0048658
Acco11g0446 484 Pfam Helix-loop-helix DNA-binding domain 268 316 IPR011598 GO:0046983
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco11g0446 Acco-ChrAcco11 6658922 6660620 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco11g0446 264 483 Basic Helix-Loop-Helix Transcription Factor Gene Family AT2G31220 47.511 4.46e-53 184
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bHLH Acco11g0446 HLH 2.1e-09 No_clan